Reference : First draft genome sequence of a strain belonging to the Zoogloea genus and its gene ...

	Document type :	Scientific journals : Article
	Discipline(s) :	Life sciences : Biotechnology
	Focus Areas :	Systems Biomedicine
	To cite this reference:	http://hdl.handle.net/10993/33026

Title :	First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ
Language :	English
Author, co-author :	Muller, Emilie* [University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB) > >]
	Narayanasamy, Shaman* [University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB) > >]
	Zeimes, Myriam [> >]
	Laczny, Cedric Christian [University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB) > >]
	Lebrun, Laura [University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB) > >]
	Herold, Malte [University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB) > >]
	Hicks, Nathan D. [> >]
	Gillice, John D. [> >]
	Schupp, James M. [> >]
	Keim, Paul [> >]
	Wilmes, Paul [University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB) > >]
	* These authors have contributed equally to this work.
Publication date :	18-Oct-2017
Journal title :	Standards in Genomic Sciences
Publisher :	BioMed Central
Volume :	12
Issue/season :	64
Peer reviewed :	Yes
Audience :	International
ISSN :	1944-3277
City :	London
Country :	United Kingdom
Keywords :	[en] genome ; metgenomics ; metatranscriptomics ; sequencing ; biofuel ; bioplastics
Abstract :	[en] The Gram-negative beta-proteobacterium Zoogloea sp. LCSB751 (LMG 29444) was newly isolated from foaming activated sludge of a municipal wastewater treatment plant. Here, we describe its draft genome sequence and annotation together with a general physiological and genomic analysis, as the first sequenced representative of the Zoogloea genus. Moreover, Zoogloea sp. gene expression in its environment is described using metatranscriptomic data obtained from the same treatment plant. The presented genomic and transcriptomic information demonstrate a pronounced capacity of this genus to synthesize poly-β-hydroxyalkanoate within wastewater.
Research centres :	Luxembourg Centre for Systems Biomedicine (LCSB): Eco-Systems Biology (Wilmes Group)
Funders :	Fonds National de la Recherche - FnR
Target :	Researchers ; General public
Permalink :	http://hdl.handle.net/10993/33026
DOI :	10.1186/s40793-017-0274-y
FnR project :	FnR ; FNR3951311 > Paul Wilmes > SYSBIONAMA > Systems Biology Of Natural Microbial Assemblages > 01/02/2010 > 31/01/2015 > 2009

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