Article (Scientific journals)
First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ
Muller, Emilie; Narayanasamy, Shaman; Zeimes, Myriam et al.
2017In Standards in Genomic Sciences, 12 (64)
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Keywords :
genome; metgenomics; metatranscriptomics; sequencing; biofuel; bioplastics
Abstract :
[en] The Gram-negative beta-proteobacterium Zoogloea sp. LCSB751 (LMG 29444) was newly isolated from foaming activated sludge of a municipal wastewater treatment plant. Here, we describe its draft genome sequence and annotation together with a general physiological and genomic analysis, as the first sequenced representative of the Zoogloea genus. Moreover, Zoogloea sp. gene expression in its environment is described using metatranscriptomic data obtained from the same treatment plant. The presented genomic and transcriptomic information demonstrate a pronounced capacity of this genus to synthesize poly-β-hydroxyalkanoate within wastewater.
Research center :
- Luxembourg Centre for Systems Biomedicine (LCSB): Eco-Systems Biology (Wilmes Group)
Disciplines :
Biotechnology
Author, co-author :
Muller, Emilie  ;  University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB)
Narayanasamy, Shaman  ;  University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB)
Zeimes, Myriam
Laczny, Cedric Christian  ;  University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB)
Lebrun, Laura ;  University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB)
Herold, Malte ;  University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB)
Hicks, Nathan D.
Gillice, John D.
Schupp, James M.
Keim, Paul
Wilmes, Paul ;  University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB)
 These authors have contributed equally to this work.
External co-authors :
yes
Language :
English
Title :
First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ
Publication date :
18 October 2017
Journal title :
Standards in Genomic Sciences
ISSN :
1944-3277
Publisher :
BioMed Central, London, United Kingdom
Volume :
12
Issue :
64
Peer reviewed :
Peer Reviewed verified by ORBi
Focus Area :
Systems Biomedicine
FnR Project :
FNR3951311 - Systems Biology Of Natural Microbial Assemblages, 2009 (01/02/2010-31/01/2015) - Paul Wilmes
Funders :
FNR - Fonds National de la Recherche [LU]
Available on ORBilu :
since 14 November 2017

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