Profil

HEROLD Malte

Main Referenced Co-authors
WILMES, Paul  (15)
MAY, Patrick  (8)
MULLER, Emilie  (7)
LACZNY, Cedric Christian  (6)
NARAYANASAMY, Shaman  (6)
Main Referenced Keywords
Biomining (2); Acidophiles (1); Ammonia-nitrogen (1); Anaerobic digestion (1); Anaerobic digestion process (1);
Main Referenced Unit & Research Centers
Luxembourg Centre for Systems Biomedicine (LCSB): Eco-Systems Biology (Wilmes Group) (7)
LIST - Luxembourg Institute of Science & Technology (1)
Luxembourg Centre for Systems Biomedicine (LCSB): Bioinformatics Core (R. Schneider Group) (1)
Luxembourg Centre for Systems Biomedicine (LCSB): Medical Translational Research (J. Schneider Group) (1)
Main Referenced Disciplines
Biotechnology (8)
Microbiology (8)
Environmental sciences & ecology (4)
Genetics & genetic processes (2)
Life sciences: Multidisciplinary, general & others (2)

Publications (total 17)

The most downloaded
193 downloads
Narayanasamy, S., Jarosz, Y., Muller, E., Buschart, A., Herold, M., Kaysen, A., Laczny, C. C., Pinel, N., May, P., & Wilmes, P. (December 2016). IMP: a pipeline for reproducible referenceindependent integrated metagenomic and metatranscriptomic analyses. Genome Biology, 17, 260. doi:10.1186/s13059-016-1116-8 https://hdl.handle.net/10993/30495

The most cited

181 citations (Scopus®)

Wampach, L., Heintz, A., Fritz, J., Ramiro Garcia, J., Habier, J., Herold, M., Narayanasamy, S., Kaysen, A., Hogan, A., Bindl, L., Bottu, J., Halder, R., Sjöqvist, C., May, P., Andersson, A., de Beaufort, C., & Wilmes, P. (2018). Birth mode is associated with earliest strain-conferred gut microbiome functions and immunostimulatory potential. Nature Communications. doi:10.1038/s41467-018-07631-x https://hdl.handle.net/10993/38650

Lemaigre, S., Gerin, P. A., Adam, G., Klimek, D., Goux, X., HEROLD, M., Frkova, Z., CALUSINSKA, M., & DELFOSSE, P. (02 December 2023). Potential of acetic acid to restore methane production in anaerobic reactors critically intoxicated by ammonia as evidenced by metabolic and microbial monitoring. Biotechnology for biofuels and bioproducts, 16 (1), 188. doi:10.1186/s13068-023-02438-5
Peer reviewed

Martinez Arbas, S., Busi, S. B., Teixeira Queirós, P., de Nies, L., Herold, M., May, P., Wilmes, P., Muller, E., & Narayanasamy, S. (2021). Challenges, Strategies, and Perspectives for Reference-Independent Longitudinal Multi-Omic Microbiome Studies. Frontiers in Genetics. doi:10.3389/fgene.2021.666244
Peer Reviewed verified by ORBi

Buetti-Dinh, A., Galli, V., Bellenberg, S., Ilie, O., Herold, M., Christel, S., Boretska, M., Pivkin, I. V., Wilmes, P., Sand, W., Vera, M., & Dopson, M. (2019). Deep neural networks outperform human expert's capacity in characterizing bioleaching bacterial biofilm composition. Biotechnology Reports. doi:10.1016/j.btre.2019.e00321
Peer Reviewed verified by ORBi

Herold, M. (2018). Integration of omics data for biotechnology-relevant microbial communities [Doctoral thesis, Unilu - University of Luxembourg]. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/37648

Martinez Arbas, S., Narayanasamy, S., Herold, M., Lebrun, L., Hicks, N. D., Price, L. B., Gillece, J. D., Schupp, J. M., Lam, T., Laczny, C. C., Ye, Y., Keim, P. S., Muller, E. E. L., May, P., & Wilmes, P. (19 October 2018). Critical transitions in microbial communities: mobile genetic elements as drivers of the microbial community dynamics within activated sludge of wastewater treatment [Poster presentation]. PhD days 2018, Belval, Luxembourg.

Trezzi, J.-P., Heintz, A., Muller, E., Narayanasamy, S., Jarosz, Y., Herold, M., Kaysen, A., Laczny, C. C., May, P., & Wilmes, P. (August 2018). Microbiome-derived Multi-omicBiomarkers for Early-stage Detection and Stratification of Parkinson's Disease [Poster presentation]. 17th International Symposium on Microbial Ecology.

Herold, M., Narayanasamy, S., Martinez Arbas, S., Muller, E., Kleine-Borgmann, A. L., Lebrun, L., Roume, H., Sheik, A., Bessarab, I., Williams, R., Gillece, J., Schupp, J., Keim, P., Jäger, C., Hoopmann, M., Li, S., Tang, H., Heintz, A., May, P., ... Wilmes, P. (August 2018). Integrated time-resolved multi-omics for understanding microbial niche ecology [Poster presentation]. 17th International Symposium on Microbial Ecology, Leipzig, Germany.

Christel, S., Herold, M., Bellenberg, S., Buetti-Dinh, A., El Hajjami, M., Pivkin, I., Sand, W., Wilmes, P., Poetsch, A., & Dopson, M. (2018). Weak Iron Oxidation by Sulfobacillus thermosulfidooxidans Maintains a Favorable Redox Potential for Chalcopyrite Bioleaching. Frontiers in Microbiology, 9 (December), 1-12. doi:10.3389/fmicb.2018.03059
Peer Reviewed verified by ORBi

Bellenberg, S., Buetti-Dinh, A., Galli, V., Ilie, O., Herold, M., Christel, S., Boretska, M., Pivkin, I. V., Wilmes, P., Sand, W., Vera, M., & Dopson, M. (2018). Automated Microscopic Analysis of Metal Sulfide Colonization by Acidophilic Microorganisms. Applied and Environmental Microbiology, 84 (20). doi:10.1128/AEM.01835-18
Peer Reviewed verified by ORBi

Wampach, L., Heintz, A., Fritz, J., Ramiro Garcia, J., Habier, J., Herold, M., Narayanasamy, S., Kaysen, A., Hogan, A., Bindl, L., Bottu, J., Halder, R., Sjöqvist, C., May, P., Andersson, A., de Beaufort, C., & Wilmes, P. (2018). Birth mode is associated with earliest strain-conferred gut microbiome functions and immunostimulatory potential. Nature Communications. doi:10.1038/s41467-018-07631-x
Peer Reviewed verified by ORBi

Muller, E., Faust, K., Widder, S., Herold, M., Martinez Arbas, S., & Wilmes, P. (2018). Using metabolic networks to resolve ecological properties of microbiomes. Current Opinion in Systems Biology. doi:10.1016/j.coisb.2017.12.004
Peer reviewed

Muller, E.* , Narayanasamy, S.* , Zeimes, M., Laczny, C. C., Lebrun, L., Herold, M., Hicks, N. D., Gillice, J. D., Schupp, J. M., Keim, P., & Wilmes, P. (18 October 2017). First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ. Standards in Genomic Sciences, 12 (64). doi:10.1186/s40793-017-0274-y
Peer Reviewed verified by ORBi
* These authors have contributed equally to this work.

Martinez Arbas, S., Narayanasamy, S., Herold, M., May, P., & Wilmes, P. (21 July 2017). Comparative integrated-omic analyses of phage-host interactions within natural and engineered microbial communities [Poster presentation]. ISCB student council symposium, Prague, Czechia.

Christel, S.* , Herold, M.* , Bellenberg, S., El Hajjami, M., Buetti-Dinh, A., Pivkin, I. V., Sand, W., Wilmes, P., Poetsch, A., & Dopson, M. (2017). Multi-omics reveal the lifestyle of the acidophilic, mineral-oxidizing model species Leptospirillum ferriphilum(T). Applied and Environmental Microbiology. doi:10.1128/AEM.02091-17
Peer Reviewed verified by ORBi
* These authors have contributed equally to this work.

Narayanasamy, S., Jarosz, Y., Muller, E., Buschart, A., Herold, M., Kaysen, A., Laczny, C. C., Pinel, N., May, P., & Wilmes, P. (December 2016). IMP: a pipeline for reproducible referenceindependent integrated metagenomic and metatranscriptomic analyses. Genome Biology, 17, 260. doi:10.1186/s13059-016-1116-8
Peer Reviewed verified by ORBi

Laczny, C. C., Muller, E., Heintz, A., Herold, M., Lebrun, L., Hogan, A., May, P., de Beaufort, C., & Wilmes, P. (2016). Identification, recovery, and refinement of hitherto undescribed population-level genomes from the human gastrointestinal tract. Frontiers in Microbiology, 7 (884). doi:10.3389/fmicb.2016.00884
Peer Reviewed verified by ORBi

Christel, S., Dopson, M., Vera, M., Sand, W., Herold, M., Wilmes, P., Buetti-Dinh, A., Pivkin, I., Poetsch, A., Nygren, J., & Kubista, M. (2015). Systems Biology of Acidophile Biofilms for Efficient Metal Extraction. Advanced Materials Research, 1130, 312-315. doi:10.4028/www.scientific.net/AMR.1130.312
Peer reviewed

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