Profil

NARAYANASAMY Shaman

Main Referenced Co-authors
WILMES, Paul  (13)
MULLER, Emilie  (10)
BUSCHART, Anna  (9)
LACZNY, Cedric Christian  (9)
MAY, Patrick  (9)
Main Referenced Keywords
Metagenomics (3); Microbiome (3); drug discovery (2); Metatranscriptomics (2); Microbial ecology (2);
Main Referenced Unit & Research Centers
Luxembourg Centre for Systems Biomedicine (LCSB): Eco-Systems Biology (Wilmes Group) (8)
Luxembourg Centre for Systems Biomedicine (LCSB): Bioinformatics Core (R. Schneider Group) (2)
ULHPC - University of Luxembourg: High Performance Computing (2)
Centre Hospitalier de Luxembourg (1)
IBBL - Integrated BioBank of Luxembourg (1)
Main Referenced Disciplines
Microbiology (12)
Environmental sciences & ecology (7)
Biotechnology (5)
Life sciences: Multidisciplinary, general & others (4)
Genetics & genetic processes (2)

Publications (total 16)

The most downloaded
747 downloads
Narayanasamy, S. (2017). Development of an integrated omics in silico workflow and its application for studying bacteria-phage interactions in a model microbial community [Doctoral thesis, Unilu - University of Luxembourg]. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/29800 https://hdl.handle.net/10993/29800

The most cited

185 citations (Scopus®)

Wampach, L., Heintz, A., Hogan, A., Muller, E., Narayanasamy, S., Laczny, C. C., Hugerth, L., Bindl, L., Bottu, J., Andersson, A., de Beaufort, C., & Wilmes, P. (2017). Colonization and Succession within the Human Gut Microbiome by Archaea, Bacteria, and Microeukaryotes during the First Year of Life. Frontiers in Microbiology. doi:10.3389/fmicb.2017.00738 https://hdl.handle.net/10993/31318

Mokou, M.* , Narayanasamy, S., Stroggilos, R., Balaur, I.-A., Vlahou, A., Mischak, H., & Frantzi, M. (2023). A Drug Repurposing Pipeline Based on Bladder Cancer Integrated Proteotranscriptomics Signatures. In J. Walker (Ed.), Methods in Molecular Biology. Springer. doi:10.1007/978-1-0716-3291-8_4

Martinez Arbas, S., Busi, S. B., Teixeira Queirós, P., de Nies, L., Herold, M., May, P., Wilmes, P., Muller, E., & Narayanasamy, S. (2021). Challenges, Strategies, and Perspectives for Reference-Independent Longitudinal Multi-Omic Microbiome Studies. Frontiers in Genetics. doi:10.3389/fgene.2021.666244
Peer Reviewed verified by ORBi

Martinez Arbas, S., Narayanasamy, S., Herold, M., Lebrun, L., Hoopmann, M. R., Li, S., Lam, T. J., Kunath, B. J., Hicks, N. D., Liu, C. M., Price, L. B., Laczny, C. C., Gillece, J. D., Schupp, J. M., Keim, P. S., Moritz, R. L., Faust, K., Tang, H., Ye, Y., ... Wilmes, P. (2021). Roles of bacteriophages, plasmids and CRISPR immunity in microbial community dynamics revealed using time-series integrated meta-omics. Nature Microbiology, 6 (1), 123--135. doi:10.1038/s41564-020-00794-8
Peer Reviewed verified by ORBi

Trezzi, J.-P., Heintz, A., Muller, E., Narayanasamy, S., Jarosz, Y., Herold, M., Kaysen, A., Laczny, C. C., May, P., & Wilmes, P. (August 2018). Microbiome-derived Multi-omicBiomarkers for Early-stage Detection and Stratification of Parkinson's Disease [Poster presentation]. 17th International Symposium on Microbial Ecology.

Herold, M., Narayanasamy, S., Martinez Arbas, S., Muller, E., Kleine-Borgmann, A. L., Lebrun, L., Roume, H., Sheik, A., Bessarab, I., Williams, R., Gillece, J., Schupp, J., Keim, P., Jäger, C., Hoopmann, M., Li, S., Tang, H., Heintz, A., May, P., ... Wilmes, P. (August 2018). Integrated time-resolved multi-omics for understanding microbial niche ecology [Poster presentation]. 17th International Symposium on Microbial Ecology, Leipzig, Germany.

Wampach, L., Heintz, A., Fritz, J., Ramiro Garcia, J., Habier, J., Herold, M., Narayanasamy, S., Kaysen, A., Hogan, A., Bindl, L., Bottu, J., Halder, R., Sjöqvist, C., May, P., Andersson, A., de Beaufort, C., & Wilmes, P. (2018). Birth mode is associated with earliest strain-conferred gut microbiome functions and immunostimulatory potential. Nature Communications. doi:10.1038/s41467-018-07631-x
Peer Reviewed verified by ORBi

Muller, E.* , Narayanasamy, S.* , Zeimes, M., Laczny, C. C., Lebrun, L., Herold, M., Hicks, N. D., Gillice, J. D., Schupp, J. M., Keim, P., & Wilmes, P. (18 October 2017). First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ. Standards in Genomic Sciences, 12 (64). doi:10.1186/s40793-017-0274-y
Peer Reviewed verified by ORBi
* These authors have contributed equally to this work.

Wampach, L., Heintz, A., Hogan, A., Muller, E., Narayanasamy, S., Laczny, C. C., Hugerth, L., Bindl, L., Bottu, J., Andersson, A., de Beaufort, C., & Wilmes, P. (2017). Colonization and Succession within the Human Gut Microbiome by Archaea, Bacteria, and Microeukaryotes during the First Year of Life. Frontiers in Microbiology. doi:10.3389/fmicb.2017.00738
Peer Reviewed verified by ORBi

Narayanasamy, S. (2017). Development of an integrated omics in silico workflow and its application for studying bacteria-phage interactions in a model microbial community [Doctoral thesis, Unilu - University of Luxembourg]. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/29800

Kaysen, A., Heintz, A., Muller, E., Narayanasamy, S., Wampach, L., Laczny, C. C., Graf, N., Simon, A., Franke, K., Bittenbring, J., Wilmes, P., & Schneider, J. (2017). Integrated meta-omic analyses of the gastrointestinal tract microbiome in patients undergoing allogeneic hematopoietic stem cell transplantation. Translational Research: the Journal of Laboratory and Clinical Medicine. doi:10.1016/j.trsl.2017.06.008
Peer Reviewed verified by ORBi

Narayanasamy, S., Jarosz, Y., Muller, E., Buschart, A., Herold, M., Kaysen, A., Laczny, C. C., Pinel, N., May, P., & Wilmes, P. (December 2016). IMP: a pipeline for reproducible referenceindependent integrated metagenomic and metatranscriptomic analyses. Genome Biology, 17, 260. doi:10.1186/s13059-016-1116-8
Peer Reviewed verified by ORBi

Alex Namasivayam, A., Morales, A. F., Lacave, A. M. F., Tallam, A., Simovic, B., Alfaro, D. G., Bobbili, D. R., Martin, F., Androsova, G., Shvydchenko, I., Park, J., Calvo, J. V., Hoeng, J., Peitsch, M. C., Racero, M. G. V., Biryukov, M., Talikka, M., Perez, M. B., Rohatgi, N., ... Xiang, Y. (2016). Community-Reviewed Biological Network Models for Toxicology and Drug Discovery Applications. Gene Regulation and Systems Biology, 10, 51-66. doi:10.4137/GRSB.S39076
Peer Reviewed verified by ORBi

Kaysen, A., Buschart, A., May, P., Laczny, C. C., Narayanasamy, S., Graf, N., Simon, A., Bittenbring, J., Kreis, S., Schneider, J., & Wilmes, P. (June 2015). Dynamic change of host gastrointestinal microbiome and immune status in relation to mucosal barrier effects during chemotherapy and immune ablative intervention in humans [Poster presentation]. The Human Microbiome, Heidelberg, Germany.

Narayanasamy, S., Muller, E., Sheik, A., & Wilmes, P. (2015). Integrated omics for the identification of key functionalities in biological wastewater treatment microbial communities. Microbial Biotechnology. doi:10.1111/1751-7915.12255
Peer Reviewed verified by ORBi

Roume, H., Buschart, A., Muller, E., May, P., Satagopam, V., Laczny, C. C., Narayanasamy, S., Lebrun, L., Hoopmann, M., Schupp, J., Gillece, J., Hicks, N., Engelthaler, D., Sauter, T., Keim, P., Moritz, R., & Wilmes, P. (2015). Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks. Biofilms and Microbiomes, 1 (15007). doi:10.1038/npjbiofilms.2015.7
Peer Reviewed verified by ORBi

Muller, E., Pinel, N., Laczny, C. C., Hoopmann, M., Narayanasamy, S., Lebrun, L., Roume, H., Lin, J., May, P., Hicks, N., Buschart, A., Wampach, L., Liu, C., Price, L., Gillece, J., Guignard, C., Schupp, J., Vlassis, N., Baliga, ... Wilmes, P. (2014). Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage. Nature Communications. doi:10.1038/ncomms6603
Peer Reviewed verified by ORBi

Contact ORBilu