Article (Scientific journals)
Genetic Architecture of Parkinson's Disease in the Indian Population: Harnessing Genetic Diversity to Address Critical Gaps in Parkinson's Disease Research.
Rajan, Roopa; Divya, K. P.; Kandadai, Rukmini Mridula et al.
2020In Frontiers in Neurology, 11, p. 524
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Keywords :
Parkinson's disease; biobank; common genetic variation; genetic diversity; genome-wide association study
Abstract :
[en] Over the past two decades, our understanding of Parkinson's disease (PD) has been gleaned from the discoveries made in familial and/or sporadic forms of PD in the Caucasian population. The transferability and the clinical utility of genetic discoveries to other ethnically diverse populations are unknown. The Indian population has been under-represented in PD research. The Genetic Architecture of PD in India (GAP-India) project aims to develop one of the largest clinical/genomic bio-bank for PD in India. Specifically, GAP-India project aims to: (1) develop a pan-Indian deeply phenotyped clinical repository of Indian PD patients; (2) perform whole-genome sequencing in 500 PD samples to catalog Indian genetic variability and to develop an Indian PD map for the scientific community; (3) perform a genome-wide association study to identify novel loci for PD and (4) develop a user-friendly web-portal to disseminate results for the scientific community. Our "hub-spoke" model follows an integrative approach to develop a pan-Indian outreach to develop a comprehensive cohort for PD research in India. The alignment of standard operating procedures for recruiting patients and collecting biospecimens with international standards ensures harmonization of data/bio-specimen collection at the beginning and also ensures stringent quality control parameters for sample processing. Data sharing and protection policies follow the guidelines established by local and national authorities.We are currently in the recruitment phase targeting recruitment of 10,200 PD patients and 10,200 healthy volunteers by the end of 2020. GAP-India project after its completion will fill a critical gap that exists in PD research and will contribute a comprehensive genetic catalog of the Indian PD population to identify novel targets for PD.
Disciplines :
Genetics & genetic processes
Author, co-author :
Rajan, Roopa;  Department of Neurology, All India Institute of Medical Sciences, New Delhi, India
Divya, K. P.;  Sree Chitra Tirunal Institute for Medical Sciences, Trivandrum, India
Kandadai, Rukmini Mridula;  Department of Neurology, Nizam's Institute of Medical Sciences, Hyderabad, India
Yadav, Ravi;  National Institute of Mental Health and Neurosciences (NIMHANS), Bengaluru, India
Satagopam, Venkata ;  University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB)
Madhusoodanan, U. K.;  Sree Chitra Tirunal Institute for Medical Sciences, Trivandrum, IndiaSree Chitra Tirunal Institute for Medical Sciences, Trivandrum, India
Agarwal, Pankaj;  Movement Disorders Clinic, Global Hospitals, Mumbai, India
Kumar, Niraj;  All India Institute of Medical Sciences, Rishikesh, India
Ferreira, Teresa;  Goa Medical College, Panaji, India
Kumar, Hrishikesh;  Institute of Neurosciences, Kolkata, India
Sreeram Prasad, A. V.;  Lourdes Hospital, Kochi, India
Shetty, Kuldeep;  Narayana Hrudayalaya Multispeciality Hospital, Bangalore, India
Mehta, Sahil;  Department of Neurology, PGIMER, Chandigarh, India
Desai, Soaham;  Shree Krishna Hospital and Pramukhswami Medical College, Karamsad, India
Kumar, Suresh
Prashanth, L. K.
Bhatt, Mohit
Wadia, Pettarusp
Ramalingam, Sudha
Wali, G. M.
Pandey, Sanjay
Bartusch, Felix
Hannussek, Maximilian
Krüger, Jens
Kumar-Sreelatha, Ashwin
Grover, Sandeep
Lichtner, Peter
Sturm, Marc
Roeper, Jochen
Busskamp, Volker
Chandak, Giriraj R.
Schwamborn, Jens Christian ;  University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB) > Life Science Research Unit
Seth, Pankaj;  National Brain Research Centre, Gurugram, India
Gasser, Thomas;  Department of Neurodegenerative Diseases, Hertie Institute for Clinical Brain Research, University of Tübingen, Tübingen, Germany
Riess, Olaf;  Institute for Medical Genetics and Applied Genomics, University of Tubingen, Tübingen, Germany
Goyal, Vinay
Pal, Pramod Kumar
Borgohain, Rupam
Krüger, Rejko ;  University of Luxembourg > Faculty of Science, Technology and Communication (FSTC) > Life Science Research Unit
Kishore, Asha;  Sree Chitra Tirunal Institute for Medical Sciences, Trivandrum, India
Sharma, Manu;  Centre for Genetic Epidemiology, Institute for Clinical Epidemiology and Applied Biometry, University of Tubingen, Tübingen, Germany
More authors (31 more) Less
External co-authors :
yes
Language :
English
Title :
Genetic Architecture of Parkinson's Disease in the Indian Population: Harnessing Genetic Diversity to Address Critical Gaps in Parkinson's Disease Research.
Publication date :
18 June 2020
Journal title :
Frontiers in Neurology
ISSN :
1664-2295
Publisher :
Frontiers Media S.A., Switzerland
Volume :
11
Pages :
524
Peer reviewed :
Peer Reviewed verified by ORBi
Focus Area :
Systems Biomedicine
FnR Project :
FNR11264123 - Ncer-pd, 2015 (01/01/2015-30/11/2020) - Rejko Krüger
Commentary :
Copyright © 2020 Rajan, Divya, Kandadai, Yadav, Satagopam, Madhusoodanan, Agarwal, Kumar, Ferreira, Kumar, Sreeram Prasad, Shetty, Mehta, Desai, Kumar, Prashanth, Bhatt, Wadia, Ramalingam, Wali, Pandey, Bartusch, Hannussek, Krüger, Kumar-Sreelatha, Grover, Lichtner, Sturm, Roeper, Busskamp, Chandak, Schwamborn, Seth, Gasser, Riess, Goyal, Pal, Borgohain, Krüger, Kishore, Sharma and the Lux-GIANT Consortium.
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