Article (Scientific journals)
Review of Current Human Genome-Scale Metabolic Models for Brain Cancer and Neurodegenerative Diseases.
KISHK, Ali; PIRES PACHECO, Maria Irene; HEURTAUX, Tony et al.
2022In Cells, 11 (16)
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Keywords :
Biomass; Brain Neoplasms/genetics; Genome, Human; Glioma; Humans; Neurodegenerative Diseases/genetics; astrocyte; brain metabolism; metabolic modelling; neurodegenerative diseases; neuron
Abstract :
[en] Brain disorders represent 32% of the global disease burden, with 169 million Europeans affected. Constraint-based metabolic modelling and other approaches have been applied to predict new treatments for these and other diseases. Many recent studies focused on enhancing, among others, drug predictions by generating generic metabolic models of brain cells and on the contextualisation of the genome-scale metabolic models with expression data. Experimental flux rates were primarily used to constrain or validate the model inputs. Bi-cellular models were reconstructed to study the interaction between different cell types. This review highlights the evolution of genome-scale models for neurodegenerative diseases and glioma. We discuss the advantages and drawbacks of each approach and propose improvements, such as building bi-cellular models, tailoring the biomass formulations for glioma and refinement of the cerebrospinal fluid composition.
Disciplines :
Life sciences: Multidisciplinary, general & others
Author, co-author :
KISHK, Ali ;  University of Luxembourg > Faculty of Science, Technology and Medicine (FSTM) > Department of Life Sciences and Medicine (DLSM)
PIRES PACHECO, Maria Irene ;  University of Luxembourg > Faculty of Science, Technology and Medicine (FSTM) > Department of Life Sciences and Medicine (DLSM)
HEURTAUX, Tony ;  University of Luxembourg > Faculty of Science, Technology and Medicine (FSTM) > Department of Life Sciences and Medicine (DLSM)
SINKKONEN, Lasse  ;  University of Luxembourg > Faculty of Science, Technology and Medicine (FSTM) > Department of Life Sciences and Medicine (DLSM)
PANG, Jun  ;  University of Luxembourg > Faculty of Science, Technology and Medicine (FSTM) > Department of Computer Science (DCS)
Fritah, Sabrina
NICLOU, Simone ;  University of Luxembourg > Faculty of Science, Technology and Communication (FSTC)
SAUTER, Thomas ;  University of Luxembourg > Faculty of Science, Technology and Medicine (FSTM) > Department of Life Sciences and Medicine (DLSM)
External co-authors :
no
Language :
English
Title :
Review of Current Human Genome-Scale Metabolic Models for Brain Cancer and Neurodegenerative Diseases.
Publication date :
2022
Journal title :
Cells
eISSN :
2073-4409
Publisher :
Multidisciplinary Digital Publishing Institute (MDPI), Basel, Switzerland
Volume :
11
Issue :
16
Peer reviewed :
Peer Reviewed verified by ORBi
Available on ORBilu :
since 14 October 2022

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