Reference : The role of common genetic variation in presumed monogenic epilepsies
Scientific journals : Article
Life sciences : Genetics & genetic processes
Human health sciences : Neurology
Systems Biomedicine
http://hdl.handle.net/10993/51496
The role of common genetic variation in presumed monogenic epilepsies
English
Campbell, Ciarán [> >]
Leu, Costin [> >]
Feng, Yen-Chen Anne [> >]
Wolking, Stefan [> >]
Moreau, Claudia [> >]
Ellis, Colin [> >]
Ganesan, Shiva [> >]
Martins, Helena [> >]
Oliver, Karen [> >]
Boothman, Isabelle [> >]
Benson, Katherine [> >]
Molloy, Anne [> >]
Brody, Lawrence [> >]
Michaud, Jacques L. [> >]
Hamdan, Fadi F. [> >]
Minassian, Berge A. [> >]
Lerche, Holger [> >]
Scheffer, Ingrid E. [> >]
Sisodiya, Sanjay [> >]
Girard, Simon [> >]
Cosette, Patrick [> >]
Delanty, Norman [> >]
Lal, Dennis [> >]
Cavalleri, Gianpiero L. [> >]
collaborative, Epi K. [> >]
Consortium, Genomics England Research [> >]
Collaborative, The Epi [> >]
May, Patrick mailto [University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB) > Bioinformatics Core]
Krause, Roland mailto [University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB) > Bioinformatics Core]
Jul-2022
eBioMedicine
81
104098
Yes
International
2352-3964
[en] Epilepsy ; DEEs ; PRS ; Genetic diagnostics
[en] Summary: Background The developmental and epileptic encephalopathies (DEEs) are the most severe group of epilepsies which co-present with developmental delay and intellectual disability (ID). DEEs usually occur in people without a family history of epilepsy and have emerged as primarily monogenic, with damaging rare mutations found in 50% of patients. Little is known about the genetic architecture of patients with DEEs in whom no pathogenic variant is identified. Polygenic risk scoring (PRS) is a method that measures a person's common genetic burden for a trait or condition. Here, we used PRS to test whether genetic burden for epilepsy is relevant in individuals with DEEs, and other forms of epilepsy with ID. Methods: Genetic data on 2,759 cases with DEEs, or epilepsy with ID presumed to have a monogenic basis, and 447,760 population-matched controls were analysed. We compared PRS for ‘all epilepsy’, ‘focal epilepsy’, and ‘genetic generalised epilepsy’ (GGE) between cases and controls. We performed pairwise comparisons between cases stratified for identifiable rare deleterious genetic variants and controls. Findings 0.0002) relative to controls, which explain between 0.08% and 3.3% of phenotypic variance. PRS was increased in cases both with and without an identified deleterious variant of major effect, and there was no significant difference in PRS between the two groups. Interpretation: We provide evidence that common genetic variation contributes to the aetiology of DEEs and other forms of epilepsy with ID, even when there is a known pathogenic variant of major effect. These results provide insight into the genetic underpinnings of the severe epilepsies and warrant a shift in our understanding of the aetiology of the DEEs as complex, rather than monogenic, disorders.
Luxembourg Centre for Systems Biomedicine (LCSB): Bioinformatics Core (R. Schneider Group)
Fonds National de la Recherche - FnR
MechEpi2; Treat-ION
Researchers ; Professionals
http://hdl.handle.net/10993/51496
10.1016/j.ebiom.2022.104098
https://www.sciencedirect.com/science/article/pii/S2352396422002791
FnR ; FNR16394868 > Alexander Skupin > MechEpi-2 > Epileptogenesis Of Genetic Epilepsies > 01/10/2021 > > 2021

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