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DE NIES Laura

Main Referenced Co-authors
BUSI, Susheel Bhanu  (9)
WILMES, Paul  (9)
MAY, Patrick  (6)
GALATA, Valentina  (3)
HALDER, Rashi  (3)
Main Referenced Keywords
Animals (1); Anti-Bacterial Agents/pharmacology (1); Antimicrobial resistance (1); Bacteria/genetics (1); functional omics (1);
Main Referenced Unit & Research Centers
Luxembourg Centre for Systems Biomedicine (LCSB) (3)
Luxembourg Centre for Systems Biomedicine (LCSB): Eco-Systems Biology (Wilmes Group) (2)
Luxembourg Centre for Systems Biomedicine (LCSB): Bioinformatics Core (R. Schneider Group) (1)
Main Referenced Disciplines
Microbiology (6)
Environmental sciences & ecology (3)
Life sciences: Multidisciplinary, general & others (2)
Public health, health care sciences & services (1)
Biochemistry, biophysics & molecular biology (1)

Publications (total 10)

The most downloaded
94 downloads
de Nies, L., Lopes, S., Busi, S. B., Galata, V., Heintz-Buschart, A., Laczny, C. C., May, P., & Wilmes, P. (2021). PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data. Microbiome. doi:10.1186/s40168-020-00993-9 https://hdl.handle.net/10993/46929

The most cited

67 citations (Scopus®)

de Nies, L., Lopes, S., Busi, S. B., Galata, V., Heintz-Buschart, A., Laczny, C. C., May, P., & Wilmes, P. (2021). PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data. Microbiome. doi:10.1186/s40168-020-00993-9 https://hdl.handle.net/10993/46929

de Nies, L., Busi, S. B., Kunath, B., May, P., & Wilmes, P. (16 September 2022). Mobilome-driven segregation of the resistome in biological wastewater treatment. eLife, 11, 81196. doi:10.7554/eLife.81196
Peer Reviewed verified by ORBi

de Nies, L. (2022). Microbiome reservoirs of antimicrobial resistance [Doctoral thesis, Unilu - University of Luxembourg]. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/50877

de Nies, L., Busi, S. B., Tsenkova, M., Halder, R., Letellier, E., & Wilmes, P. (2022). Evolution of the murine gut resistome following broad-spectrum antibiotic treatment. Nature Communications, 13 (1), 2296. doi:10.1038/s41467-022-29919-9
Peer Reviewed verified by ORBi

Galata, V., Busi, S. B., Kunath, B., de Nies, L., Calusinska, M., Halder, R., May, P., Wilmes, P., & Laczny, C. C. (2021). Functional meta-omics provide critical insights into long- and short-read assemblies. Briefings in Bioinformatics. doi:10.1093/bib/bbab330
Peer Reviewed verified by ORBi

Martinez Arbas, S., Busi, S. B., Teixeira Queirós, P., de Nies, L., Herold, M., May, P., Wilmes, P., Muller, E., & Narayanasamy, S. (2021). Challenges, Strategies, and Perspectives for Reference-Independent Longitudinal Multi-Omic Microbiome Studies. Frontiers in Genetics. doi:10.3389/fgene.2021.666244
Peer Reviewed verified by ORBi

Busi, S. B.* , de Nies, L.* , Habier, J., Wampach, L., Heintz-Buschart, A., Fritz, J., Halder, R., May, P., de Beaufort, C., & Wilmes, P. (2021). Persistence of birth mode-dependent effects on gut microbiome composition, immune system stimulation and antimicrobial resistance during the first year of life. ISME Communications. doi:10.1038/s43705-021-00003-5
Peer reviewed
* These authors have contributed equally to this work.

de Nies, L., Lopes, S., Busi, S. B., Galata, V., Heintz-Buschart, A., Laczny, C. C., May, P., & Wilmes, P. (2021). PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data. Microbiome. doi:10.1186/s40168-020-00993-9
Peer Reviewed verified by ORBi

Busi, S. B., de Nies, L., Pramateftaki, P., Bourquin, M., Ezzat, L. I., Kohler, T. J., Fodelianakis, S., Michoud, G., Peter, H., Styllas, M., Tolosano, M., De Staercke, V., Schön, M., Galata, V., Wilmes, P., & Battin, T. (2021). Glacier-fed stream biofilms harbour diverse resistomes and biosynthetic gene clusters 2021.11.18.469141. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/48975. doi:10.1101/2021.11.18.469141

Busi, S. B., Bourquin, M., Fodelianakis, S., Michoud, G., Kohler, T. J., Peter, H., Pramateftaki, P., Styllas, M., Tolosano, M., De Staercke, V., Schön, M., de Nies, L., Marasco, R., Daffonchio, D., Ezzat, L. I., Wilmes, P., & Battin, T. J. (2021). Genomic and metabolic adaptations of biofilms to ecological windows of opportunities in glacier-fed streams 2021.10.07.463499. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/48976. doi:10.1101/2021.10.07.463499

de Nies, L., Busi, S. B., Kunath, B. J., May, P., & Wilmes, P. (2021). Mobilome-driven segregation of the resistome in biological wastewater treatment 2021.11.15.468621. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/48974. doi:10.1101/2021.11.15.468621

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