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BUSI Susheel Bhanu

Main Referenced Co-authors
WILMES, Paul  (28)
MAY, Patrick  (10)
Peter, Hannes (10)
DE NIES, Laura  (9)
Fodelianakis, Stilianos (9)
Main Referenced Keywords
Bacteria/genetics (4); Humans (4); Metagenomics (4); Microbiota (4); Animals (3);
Main Referenced Unit & Research Centers
ULHPC - University of Luxembourg: High Performance Computing (7)
Luxembourg Centre for Systems Biomedicine (LCSB): Eco-Systems Biology (Wilmes Group) (5)
Luxembourg Centre for Systems Biomedicine (LCSB): Bioinformatics Core (R. Schneider Group) (3)
Luxembourg Centre for Systems Biomedicine (LCSB) (2)
Luxembourg Centre for Systems Biomedicine (LCSB): Clinical & Experimental Neuroscience (Krüger Group) (1)
Main Referenced Disciplines
Microbiology (14)
Environmental sciences & ecology (6)
Physical, chemical, mathematical & earth Sciences: Multidisciplinary, general & others (5)
Life sciences: Multidisciplinary, general & others (4)
Food science (2)

Publications (total 28)

The most downloaded
268 downloads
DESPOTOVIC, M., de Nies, L., BUSI, S. B., & WILMES, P. (2023). Reservoirs of antimicrobial resistance in the context of One Health. Current Opinion in Microbiology, 73, 102291. doi:10.1016/j.mib.2023.102291 https://hdl.handle.net/10993/54895

The most cited

184 citations (OpenAlex)

DE NIES, L., Lopes, S., BUSI, S. B., GALATA, V., Heintz-Buschart, A., LACZNY, C. C., MAY, P., & WILMES, P. (2021). PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data. Microbiome. doi:10.1186/s40168-020-00993-9 https://hdl.handle.net/10993/46929

VILLETTE, R., ORTIS SUNYER, J., NOVIKOVA, P., AHO, V., PETROV, V., HICKL, O., BUSI, S. B., DE RUDDER, C., KUNATH, B., Heintz-Buschart, A., TREZZI, J.-P., HALDER, R., JÄGER, C., LEBRUN, L., DAUJEUMONT, A., Schade, S., Janzen, A., Jehmlich, N., von Bergen, M., ... WILMES, P. (07 October 2025). Integrated multi-omics highlights alterations of gut microbiome functions in prodromal and idiopathic Parkinson’s disease. Microbiome, 13 (1). doi:10.1186/s40168-025-02227-2
Peer Reviewed verified by ORBi

Czolk, R., Codreanu-Morel, F., de Nies, L., BUSI, S. B., Halder, R., Hunewald, O., Boehm, T. M., Hefeng, F. Q., De Beaufort, C., WILMES, P., Ollert, M., & KUEHN, A. (29 July 2025). Fecal IgE Analyses Reveal a Role for Stratifying Peanut-Allergic Patients. Journal of Investigational Allergology and Clinical Immunology, 35 (4), 276 - 287. doi:10.18176/jiaci.1008
Peer Reviewed verified by ORBi

TSENKOVA, M., BRAUER, M., POZDEEV, V., KASAKIN, M., BUSI, S. B., SCHMOETTEN, M., CHEUNG, D., MEYERS, M., RODRIGUEZ, F., GAIGNEAUX, A., KONCINA, E., Gilson, C., SCHLICKER, L., Herebian, D., SCHMITZ, M., de Nies, L., Mayatepek, E., HAAN, S., de Beaufort, C., ... LETELLIER, E. (20 February 2025). Ketogenic diet suppresses colorectal cancer through the gut microbiome long chain fatty acid stearate. Nature Communications, 16 (1), 1792. doi:10.1038/s41467-025-56678-0
Peer Reviewed verified by ORBi

Ezzat, L., Peter, H., Bourquin, M., BUSI, S. B., Michoud, G., Fodelianakis, S., Kohler, T. J., Lamy, T., Geers, A., Pramateftaki, P., Baier, F., Marasco, R., Daffonchio, D., Deluigi, N., WILMES, P., Styllas, M., Schön, M., Tolosano, M., De Staercke, V., & Battin, T. J. (01 January 2025). Diversity and biogeography of the bacterial microbiome in glacier-fed streams. Nature, 637 (8046), 622 - 630. doi:10.1038/s41586-024-08313-z
Peer Reviewed verified by ORBi

Shaaban, R., BUSI, S. B., WILMES, P., Guéant, J.-L., & Heinken, A. (30 December 2024). Personalized modeling of gut microbiome metabolism throughout the first year of life. Communications Medicine, 4 (1), 281. doi:10.1038/s43856-024-00715-4
Peer Reviewed verified by ORBi

TALAVERA ANDÚJAR, B., CARDOSO PEREIRA, S. L., BUSI, S. B., Usnich, T., Borsche, M., Ertan, S., Bauer, P., Rolfs, A., HEZZAZ, S., GHELFI, J., Brüggemann, N., ANTONY, P., WILMES, P., Klein, C., GRÜNEWALD, A., & SCHYMANSKI, E. (December 2024). Exploring environmental modifiers of LRRK2-associated Parkinson's disease penetrance: An exposomics and metagenomics pilot study on household dust. Environment International, 194, 109151. doi:10.1016/j.envint.2024.109151
Peer Reviewed verified by ORBi

SCHMIT, K.* , GARCIA, P.* , SCIORTINO, A., AHO, V., Pardo Rodriguez, B., THOMAS, M., GERARDY, J.-J., Bastero Acha, I., HALDER, R., CIALINI, C., HEURTAUX, T., Ostahi, I., BUSI, S. B., Grandmougin, L., LOWNDES, T., Singh, Y., Martens, E. C., MITTELBRONN, M., BUTTINI, M.* , & WILMES, P. (26 September 2023). Fiber deprivation and microbiome-borne curli shift gut bacterial populations and accelerate disease in a mouse model of Parkinson's disease. Cell Reports, 42 (9), 113071. doi:10.1016/j.celrep.2023.113071
Peer Reviewed verified by ORBi
* These authors have contributed equally to this work.

de Nies, L., Galata, V., Martin-Gallausiaux, C., DESPOTOVIC, M., BUSI, S. B., Snoeck, C. J., DELACOUR, L., Budagavi, D. P., LACZNY, C. C., HABIER, J., Lupu, P.-C., HALDER, R., Fritz, J. V., MARQUES, T., Sandt, E., O'Sullivan, M. P., GHOSH, S., SATAGOPAM, V., Consortium, C.-V., ... WILMES, P. (09 March 2023). Altered infective competence of the human gut microbiome in COVID-19. Microbiome, 11 (1), 46. doi:10.1186/s40168-023-01472-7
Peer Reviewed verified by ORBi

NOVIKOVA, P., BUSI, S. B., Probst, A. J., MAY, P., & WILMES, P. (2023). Functional prediction of proteins from the human gut archaeome. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/58071. doi:10.1101/2023.02.01.526569

BUSI, S. B., Peter, H., Brandani, J., Kohler, T. J., Fodelianakis, S., Pramateftaki, P., Bourquin, M., Ezzat, L., Michoud, G., Lane, S., WILMES, P., & Battin, T. J. (2023). Cross-domain interactions induce community stability to benthic biofilms in proglacial streams. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/58067. doi:10.1101/2023.01.31.526486

DESPOTOVIC, M., de Nies, L., BUSI, S. B., & WILMES, P. (2023). Reservoirs of antimicrobial resistance in the context of One Health. Current Opinion in Microbiology, 73, 102291. doi:10.1016/j.mib.2023.102291
Peer Reviewed verified by ORBi

DE NIES, L., BUSI, S. B., KUNATH, B., MAY, P., & WILMES, P. (16 September 2022). Mobilome-driven segregation of the resistome in biological wastewater treatment. eLife, 11, 81196. doi:10.7554/eLife.81196
Peer Reviewed verified by ORBi

McAdams, Z. L., BUSI, S. B., Gustafson, K. L., Bivens, N., Franklin, C. L., WILMES, P., & Ericsson, A. C. (2022). Multi-omics analysis of mouse fecal microbiome reveals supplier-dependent functional differences and novel metagenome-assembled genomes. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/58063. doi:10.1101/2022.09.12.507288

Bourquin, M., BUSI, S. B., Fodelianakis, S., Peter, H., Washburne, A., Kohler, T. J., Ezzat, L., Michoud, G., WILMES, P., & Battin, T. J. (02 June 2022). The microbiome of cryospheric ecosystems. Nature Communications, 13 (1), 3087. doi:10.1038/s41467-022-30816-4
Peer Reviewed verified by ORBi

Kohler, T. J., Fodelianakis, S., Michoud, G., Ezzat, L., Bourquin, M., Peter, H., BUSI, S. B., Pramateftaki, P., Deluigi, N., Styllas, M., Tolosano, M., de Staercke, V., Schön, M., Brandani, J., Marasco, R., Daffonchio, D., WILMES, P., & Battin, T. J. (June 2022). Glacier shrinkage will accelerate downstream decomposition of organic matter and alters microbiome structure and function. Global Change Biology, 28 (12), 3846 - 3859. doi:10.1111/gcb.16169
Peer Reviewed verified by ORBi

DE NIES, L., BUSI, S. B., TSENKOVA, M., HALDER, R., LETELLIER, E., & WILMES, P. (2022). Evolution of the murine gut resistome following broad-spectrum antibiotic treatment. Nature Communications, 13 (1), 2296. doi:10.1038/s41467-022-29919-9
Peer Reviewed verified by ORBi

DE SAEDELEER, B., MALABIRADE, A., RAMIRO GARCIA, J., HABIER, J., TREZZI, J.-P., Peters, S., DAUJEUMONT, A., HALDER, R., Jäger, C., BUSI, S. B., MAY, P., Oertel, W., Mollenhauer, B., LACZNY, C. C., Hettich, R., & WILMES, P. (2021). Systematic characterization of human gut microbiome-secreted molecules by integrated multi-omics. ISME Communications. doi:10.1038/s43705-021-00078-0
Peer Reviewed verified by ORBi

Fodelianakis, S., BUSI, S. B., WILMES, P., Washburne, A., Bourquin, M., Pramateftaki, P., Kohler, T., Styllas, M., Tolosano, M., de Staercke, V., Schon, M., Brandani, J., Peter, H., & Battin, T. (2021). Microdiversity characterizes prevalent phylogenetic clades in the glacier-fed stream microbiome. ISME Journal. doi:10.1038/s41396-021-01106-6
Peer reviewed

GALATA, V., BUSI, S. B., KUNATH, B., DE NIES, L., CALUSINSKA, M., HALDER, R., MAY, P., WILMES, P., & LACZNY, C. C. (2021). Functional meta-omics provide critical insights into long- and short-read assemblies. Briefings in Bioinformatics. doi:10.1093/bib/bbab330
Peer Reviewed verified by ORBi

MARTINEZ ARBAS, S., BUSI, S. B., TEIXEIRA QUEIRÓS, P., DE NIES, L., HEROLD, M., MAY, P., WILMES, P., MULLER, E., & NARAYANASAMY, S. (2021). Challenges, Strategies, and Perspectives for Reference-Independent Longitudinal Multi-Omic Microbiome Studies. Frontiers in Genetics. doi:10.3389/fgene.2021.666244
Peer Reviewed verified by ORBi

BUSI, S. B.* , DE NIES, L.* , HABIER, J., Wampach, L., Heintz-Buschart, A., FRITZ, J., HALDER, R., MAY, P., de Beaufort, C., & WILMES, P. (2021). Persistence of birth mode-dependent effects on gut microbiome composition, immune system stimulation and antimicrobial resistance during the first year of life. ISME Communications. doi:10.1038/s43705-021-00003-5
Peer reviewed
* These authors have contributed equally to this work.

DE NIES, L., Lopes, S., BUSI, S. B., GALATA, V., Heintz-Buschart, A., LACZNY, C. C., MAY, P., & WILMES, P. (2021). PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data. Microbiome. doi:10.1186/s40168-020-00993-9
Peer Reviewed verified by ORBi

BUSI, S. B., DE NIES, L., Pramateftaki, P., Bourquin, M., Ezzat, L. I., Kohler, T. J., Fodelianakis, S., Michoud, G., Peter, H., Styllas, M., Tolosano, M., De Staercke, V., Schön, M., GALATA, V., WILMES, P., & Battin, T. (2021). Glacier-fed stream biofilms harbour diverse resistomes and biosynthetic gene clusters 2021.11.18.469141. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/48975. doi:10.1101/2021.11.18.469141

BUSI, S. B., Bourquin, M., Fodelianakis, S., Michoud, G., Kohler, T. J., Peter, H., Pramateftaki, P., Styllas, M., Tolosano, M., De Staercke, V., Schön, M., DE NIES, L., Marasco, R., Daffonchio, D., Ezzat, L. I., WILMES, P., & Battin, T. J. (2021). Genomic and metabolic adaptations of biofilms to ecological windows of opportunities in glacier-fed streams 2021.10.07.463499. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/48976. doi:10.1101/2021.10.07.463499

DE NIES, L., BUSI, S. B., Kunath, B. J., MAY, P., & WILMES, P. (2021). Mobilome-driven segregation of the resistome in biological wastewater treatment 2021.11.15.468621. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/48974. doi:10.1101/2021.11.15.468621

Fodelianakis, S., Washburne, A. D., Bourquin, M., Pramateftaki, P., Kohler, T. J., Styllas, M., Tolosano, M., De Staercke, V., Schön, M., BUSI, S. B., Brandani, J., WILMES, P., Peter, H., & Battin, T. J. (2020). Homogeneous selection promotes microdiversity in the glacier-fed stream microbiome. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/58066. doi:10.1101/2020.12.03.409391

Kohler, T. J., Peter, H., Fodelianakis, S., Pramateftaki, P., Styllas, M., Tolosano, M., de Staercke, V., Schön, M., BUSI, S. B., WILMES, P., Washburne, A., & Battin, T. J. (19 November 2020). Patterns and Drivers of Extracellular Enzyme Activity in New Zealand Glacier-Fed Streams. Frontiers in Microbiology, 11, 2922. doi:10.3389/fmicb.2020.591465
Peer Reviewed verified by ORBi

BUSI, S. B.* , Pramateftaki, P.* , Brandani, J., Fodelianakis, S., Peter, H., HALDER, R., WILMES, P., & Battin, T. (2020). Optimised biomolecular extraction for metagenomic analysis of microbial biofilms from high-mountain streams. PeerJ. doi:10.7717/peerj.9973
Peer Reviewed verified by ORBi
* These authors have contributed equally to this work.

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