Paul, Soumya ; University of Luxembourg > Faculty of Science, Technology and Communication (FSTC) > Computer Science and Communications Research Unit (CSC)
Pang, Jun ; University of Luxembourg > Faculty of Science, Technology and Communication (FSTC) > Computer Science and Communications Research Unit (CSC) ; University of Luxembourg > Interdisciplinary Centre for Security, Reliability and Trust (SNT)
External co-authors :
yes
Language :
English
Title :
Scalable control of asynchronous Boolean networks
Publication date :
2019
Event name :
17th International Conference on Computational Methods in Systems Biology
Event date :
2019
By request :
Yes
Audience :
International
Main work title :
Proceedings of 17th International Conference on Computational Methods in Systems Biology (CMSB'19)
Baudin, A., Paul, S., Su, C., Pang, J.: Controlling large Boolean networks with single-step perturbations. Bioinformatics 35, i558–i567 (2019)
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Mandon, H., Su, C., Haar, S., Pang, J., Paulevé, L.: Sequential reprogramming of Boolean networks made practical. In: Bortolussi, L., Sanguinetti, G. (eds.) CMSB 2019. LNBI, pp. 3–19. Springer, Cham (2019)
Mandon, H., Su, C., Pang, J., Paul, S., Haar, S., Paulevé, L.: Algorithms for the sequential reprogramming of Boolean networks. IEEE/ACM Trans. Comput. Biol. Bioinf. (2019, accepted)
Mizera, A., Pang, J., Su, C., Yuan, Q.: ASSA-PBN: a toolbox for probabilistic Boolean networks. IEEE/ACM Trans. Comput. Biol. Bioinf. 15(4), 1203–1216 (2018)
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Paul, S., Su, C., Pang, J., Mizera, A.: A decomposition-based approach towards the control of Boolean networks. In: Proceedings of the 9th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics, pp. 11–20. ACM Press (2018)
Paul, S., Su, C., Pang, J., Mizera, A.: An efficient approach towards the source-target control of Boolean networks. IEEE/ACM Trans. Comput. Biol. Bioinf. (2019, accepted)
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Su, C., Paul, S., Pang, J.: Controlling large Boolean networks with temporary and permanent perturbations. In: Proceedings of the 23rd International Symposium on Formal Methods. LNCS. Springer (2019, accepted)
Trairatphisan, P., Mizera, A., Pang, J., Tantar, A.A., Sauter, T.: optPBN: an optimisation toolbox for probabilistic Boolean networks. PLoS ONE 9(7), e98001 (2014)
Wang, L.Z., et al.: A geometrical approach to control and controllability of nonlinear dynamical networks. Nat. Commun. 7, 11323 (2016)
Zañudo, J.G.T., Albert, R.: Cell fate reprogramming by control of intracellular network dynamics. PLoS Comput. Biol. 11(4), e1004193 (2015)
Zhao, Y., Kim, J., Filippone, M.: Aggregation algorithm towards large-scale Boolean network analysis. IEEE Trans. Autom. Control 58(8), 1976–1985 (2013)
