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GHOSH Soumyabrata

University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB) > Bioinformatics Core

ORCID
0000-0003-0659-6733
Main Referenced Co-authors
SATAGOPAM, Venkata  (15)
KRÜGER, Rejko  (7)
Maiti, Nirmalya S. (6)
PAULY, Laure  (6)
Vaillant, Michel (6)
Main Referenced Keywords
COVID-19 (5); SARS-CoV-2 (5); COVID-19/epidemiology (3); Humans (3); Luxembourg (3);
Main Referenced Unit & Research Centers
Luxembourg Centre for Systems Biomedicine (LCSB): Bioinformatics Core (R. Schneider Group) (5)
Luxembourg Centre for Systems Biomedicine (LCSB): Clinical & Experimental Neuroscience (Krüger Group) (3)
Luxembourg Centre for Systems Biomedicine (LCSB): Biomedical Data Science (Glaab Group) (2)
Luxembourg Centre for Systems Biomedicine (LCSB): Eco-Systems Biology (Wilmes Group) (2)
Integrative Research Unit: Social and Individual Development (INSIDE) > PEARL Institute for Research on Socio-Economic Inequality (IRSEI) (1)
Main Referenced Disciplines
Computer science (12)
Public health, health care sciences & services (5)
Immunology & infectious disease (4)
Neurology (2)
Human health sciences: Multidisciplinary, general & others (2)

Publications (total 26)

The most downloaded
505 downloads
Snoeck, C. J., Vaillant, M., Abdelrahman, T., SATAGOPAM, V., TURNER, J., Beaumont, K., GOMES, C., FRITZ, J., SCHRÖDER, V., KAYSEN, A., PAVELKA, L., STUTE, L., RAMOS MEYERS, G., Pauly, L., HANSEN, M., PAULY, C., Aguayo, G. A., PERQUIN, M., HANFF, A.-M., ... KRÜGER, R. (2020). Prevalence of SARS-CoV-2 infection in the Luxembourgish population: the CON-VINCE study. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/44961. doi:10.1101/2020.05.11.20092916 https://hdl.handle.net/10993/44961

The most cited

91 citations (OpenAlex)

Snoeck, C. J., Vaillant, M., Abdelrahman, T., SATAGOPAM, V., TURNER, J., Beaumont, K., GOMES, C., FRITZ, J., SCHRÖDER, V., KAYSEN, A., PAVELKA, L., STUTE, L., RAMOS MEYERS, G., Pauly, L., HANSEN, M., PAULY, C., Aguayo, G. A., PERQUIN, M., HANFF, A.-M., ... KRÜGER, R. (2020). Prevalence of SARS-CoV-2 infection in the Luxembourgish population: the CON-VINCE study. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/44961. doi:10.1101/2020.05.11.20092916 https://hdl.handle.net/10993/44961

Scientific outputs

Articles in scientific journals with peer reviewing verified by ORBi or included in HEC journal guide

MARTINS CONDE, P., Bulaev, D., RAUSCHENBERGER, A., OHNMACHT, J., Fritz, J. V., O'Sullivan, M. P., ANCIEN, F., GHOSH, S., TSURKALENKO, O., KOLODKIN, A., SATAGOPAM, V., Vaillant, M., KLUCKEN, J., KRÜGER, R., & CON-VINCE/ORCHESTRA Study Consortium. (27 October 2025). Co-occurrence of memory impairment and fatigue distinguishes post COVID from pandemic-related health effects in the 4-year CON-VINCE cohort study. Scientific Reports, 15 (1), 37381. doi:10.1038/s41598-025-19984-7
Peer Reviewed verified by ORBi

ZAGARE, A., BALAUR, I.-A., ROUGNY, A., SARAIVA, C., GOBIN, M., MONZEL, A. S., GHOSH, S., SATAGOPAM, V., & SCHWAMBORN, J. C. (31 March 2025). Deciphering shared molecular dysregulation across Parkinson's disease variants using a multi-modal network-based data integration and analysis. NPJ Parkinson's Disease, 11 (1), 63. doi:10.1038/s41531-025-00914-3
Peer Reviewed verified by ORBi

ALPER, P., DED, V., HERZINGER, S., GROUES, V., PETER, S., LEBIODA, J., EBERMANN, L., POPLETEEVA, M., BARRY, N. D., WELTER, D., GHOSH, S., BECKER, R., SCHNEIDER, R., GU, W., TREFOIS, C., & SATAGOPAM, V. (15 May 2024). DS-PACK: Tool assembly for the end-to-end support of controlled access human data sharing. Scientific Data, 11 (1), 501. doi:10.1038/s41597-024-03326-9
Peer Reviewed verified by ORBi

TSURKALENKO, O., Bulaev, D., O'Sullivan, M. P., Snoeck, C., GHOSH, S., KOLODKIN, A., ROMMES, B., GAWRON, P., Moreno, C. V., GOMES, C., KAYSEN, A., OHNMACHT, J., Schröder, V. E., PAVELKA, L., Meyers, G. R., PAULY, L., PAULY, C., HANFF, A.-M., MEYRATH, M. M. R., ... CON-VINCE consortium and the ORCHESTRA working group. (09 February 2024). Creation of a pandemic memory by tracing COVID-19 infections and immunity in Luxembourg (CON-VINCE). BMC Infectious Diseases, 24 (1), 179. doi:10.1186/s12879-024-09055-z
Peer Reviewed verified by ORBi

Hussein, R., Balaur, I., Burmann, A., CWIEK-KUPCZYNSKA, H., Gadiya, Y., GHOSH, S., Jayathissa, P., Katsch, F., KREMER, A., Lähteenmäki, J., Meng, Z., Morasek, K., C Rancourt, R., SATAGOPAM, V., Sauermann, S., Scheider, S., Stamm, T., Muehlendyck, C., & Gribbon, P. (2024). Getting ready for the European Health Data Space (EHDS): IDERHA's plan to align with the latest EHDS requirements for the secondary use of health data. Open Research Europe, 4, 160. doi:10.12688/openreseurope.18179.1
Peer Reviewed verified by ORBi

KLEE, M., AHO, V., MAY, P., Heintz-Buschart, A., LANDOULSI, Z., JONSDOTTIR, S., PAULY, C., PAVELKA, L., DELACOUR, L., KAYSEN, A., Krüger, R., WILMES, P., LEIST, A., Acharya, G., Aguayo, G., Alexandre, M., ALI, M., Ammerlann, W., ARENA, G., ... ZELIMKHANOV, G. (2024). Education as Risk Factor of Mild Cognitive Impairment: The Link to the Gut Microbiome. Journal of Prevention of Alzheimer's Disease. doi:10.14283/jpad.2024.19
Peer Reviewed verified by ORBi

PAULY, L., RESIDORI, C., BULUT, H., Bulaev, D., GHOSH, S., O'Sullivan, M. P., Fritz, J. V., Vaillant, M., ROMMES, B., SAMUEL, R., SATAGOPAM, V., KRÜGER, R., LEIST, A., CON-VINCE Consortium, & ORCHESTRA Working Group. (2024). Lessons learned from the COVID-19 pandemic: identifying hesitant groups and exploring reasons for vaccination hesitancy, from adolescence to late adulthood. Frontiers in Public Health, 12, 1456265. doi:10.3389/fpubh.2024.1456265
Peer Reviewed verified by ORBi

PAVELKA, L., RAWAL, R., GHOSH, S., PAULY, C., PAULY, L., HANFF, A.-M., KOLBER, P. L., JONSDOTTIR, S., MCINTYRE, D., AZAIZ, K., THIRY, E., Vilasboas, L., SOBOLEVA, E., GIRAITIS, M., TSURKALENKO, O., SAPIENZA, S., DIEDERICH, N., KLUCKEN, J., GLAAB, E., ... NCER-PD Consortium. (19 December 2023). Luxembourg Parkinson’s study -comprehensive baseline analysis of Parkinson’s disease and atypical parkinsonism. Frontiers in Neurology, 14. doi:10.3389/fneur.2023.1330321
Peer Reviewed verified by ORBi

WELTER, D., Rocca-Serra, P., GROUES, V., SALLAM, N., Ancien, F., SHABANI, A., Asariardakani, S., ALPER, P., GHOSH, S., Burdett, T., Sansone, S.-A., GU, W., & SATAGOPAM, V. (20 July 2023). The Translational Data Catalog - discoverable biomedical datasets. Scientific Data, 10 (1), 470. doi:10.1038/s41597-023-02258-0
Peer Reviewed verified by ORBi

de Nies, L., Galata, V., Martin-Gallausiaux, C., DESPOTOVIC, M., BUSI, S. B., Snoeck, C. J., DELACOUR, L., Budagavi, D. P., LACZNY, C. C., HABIER, J., Lupu, P.-C., HALDER, R., Fritz, J. V., MARQUES, T., Sandt, E., O'Sullivan, M. P., GHOSH, S., SATAGOPAM, V., Consortium, C.-V., ... WILMES, P. (09 March 2023). Altered infective competence of the human gut microbiome in COVID-19. Microbiome, 11 (1), 46. doi:10.1186/s40168-023-01472-7
Peer Reviewed verified by ORBi

Broderick, C., Christian, N., Apfelbacher, C., Bosma, A., Dand, N., GHOSH, S., Hangel, N., Hübenthal, M., Middelkamp-Hup, M. A., Min, J., Musters, A. H., Paternoster, L., Rodríguez, E., SATAGOPAM, V., Scordis, P., Spuls, P. I., Szymczak, S., Weidinger, S., Smith, C., ... Bipmap, C. (Other coll.). (2021). The BIOMarkers in Atopic Dermatitis and Psoriasis (BIOMAP) Glossary: developing a lingua franca to facilitate data harmonisation and cross-cohort analyses. British Journal of Dermatology. doi:10.1111/bjd.20587
Peer Reviewed verified by ORBi

Maitii, N. S., GHOSH, S., Sikdar, B. K., & Chaudhuri, P. P. (2012). Rule Vector Graph (RVG) To Design Linear Time Algorithm for Identifying the Invertibility of Periodic-Boundary Three Neighborhood Cellular Automata. Journal of Cellular Automata, 7 (4).
Peer Reviewed verified by ORBi

GHOSH, S., Maiti, N. S., Chaudhuri, P. P., & Sikdar, B. K. (2011). On Invertible Three Neighborhood Null-Boundary Uniform Cellular Automata. Complex Systems, 20 (1), 4.
Peer reviewed

Maiti, N. S., GHOSH, S., Munshi, S., & Pal Chaudhuri, P. (2010). Linear time algorithm for identifying the invertibility of null-boundary three neighborhood cellular automata. Complex Systems, 19 (1), 89.
Peer reviewed

Books

Written in collaboration

Pal Chaudhuri, P., GHOSH, S., Dutta, A., & Pal Choudhury, S. (2018). A New Kind of Computational Biology. Singapore: Springer Nature. doi:10.1007/978-981-13-1639-5

Proceedings published in a book or a journal

GHOSH, S., & Chaudhuri, P. P. (2018). Cellular Automata Model for Proteomics and Its Application in Cancer Immunotherapy. In Cellular Automata, Conference proceedings, ACRI 2018 (pp. 3-15). Switzerland: Springer Nature. doi:10.1007/978-3-319-99813-8_1
Peer reviewed

Maiti, N. S., GHOSH, S., & Chaudhuri, P. P. (2014). Cellular Automata (CA) Model for Primality Test. In Lecture Notes in Computer Science (pp. 146--155). Springer, Cham. doi:10.1007/978-3-319-11520-7_16
Peer reviewed

GHOSH, S., Maiti, N. S., & Chaudhuri, P. P. (2014). Cellular Automata Model for Protein Structure Synthesis (PSS). In Lecture Notes in Computer Science (pp. 268--277). Springer, Cham. doi:10.1007/978-3-319-11520-7_28
Peer reviewed

GHOSH, S., Maiti, N. S., & Chaudhuri, P. P. (2012). Theory and Application of Restricted Five Neighborhood Cellular Automata (R5NCA) for Protein Structure Prediction. In Lecture Notes in Computer Science. Springer, Berlin, Heidelberg. doi:10.1007/978-3-642-33350-7_37
Peer reviewed

GHOSH, S., Bachhar, T., Maiti, N. S., Mitra, I., & Chaudhuri, P. P. (2010). Theory and application of equal length cycle cellular automata (ELCCA) for enzyme classification. In International Conference on Cellular Automata. Springer, Berlin, Heidelberg.
Peer reviewed

Maiti, N. S., GHOSH, S., Shikdar, B. K., & Chaudhuri, P. P. (2010). Programmable Cellular Automata (PCA) Based Advanced Encryption Standard (AES) Hardware Architecture. In Lecture Notes in Computer Science (pp. 271--274). Springer, Berlin, Heidelberg. doi:10.1007/978-3-642-15979-4_29
Peer reviewed

Eprint/Working paper

Queralt-Rosinach, N., ALSHAIKHDEEB, B. M. M., BOLZANI, L., SHOAIB, M., Barbero, M. C., Aguiló-Castillo, S., Cirillo, D., Castro, L. J., Tsueng, G., Kalaš, M., Palmblad, M., WELTER, D., GHOSH, S., SATAGOPAM, V., & Sheriff, R. S. M. (2023). Infrastructure for synthetic health data. (1). ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/59023. doi:10.37044/osf.io/q4zgx

Snoeck, C. J., Vaillant, M., Abdelrahman, T., SATAGOPAM, V., TURNER, J., Beaumont, K., GOMES, C., FRITZ, J., SCHRÖDER, V., KAYSEN, A., PAVELKA, L., STUTE, L., RAMOS MEYERS, G., Pauly, L., HANSEN, M., PAULY, C., Aguayo, G. A., PERQUIN, M., HANFF, A.-M., ... KRÜGER, R. (2020). Prevalence of SARS-CoV-2 infection in the Luxembourgish population: the CON-VINCE study. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/44961. doi:10.1101/2020.05.11.20092916

Reports

Expert reports

LEIST, A., KLEE, M., PACCOUD, I., PAULY, L., GHOSH, S., FRITZ, J., O Sullivan, M. P., ROMMES, B., WILMES, P., KRÜGER, R., & CON-VINCE Consortium. (2021). Which demographic and socio-economic factors are associated with vaccination willingness and beliefs towards vaccination? Rapid report with first results. https://orbilu.uni.lu/handle/10993/48567

Unpublished scientific communications

Posters

PAULY, L., KLEE, M., PACCOUD, I., SATAGOPAM, V., GHOSH, S., FRITZ, J., O'Sullivan, M., WILMES, P., KRÜGER, R., & LEIST, A. (April 2022). Individual factors and beliefs determining COVID-19 vaccination willingness [Poster presentation]. ECCMID 2022.

WELTER, D., VEGA MORENO, C. G., BIRYUKOV, M., GROUES, V., GHOSH, S., SCHNEIDER, R., & SATAGOPAM, V. (27 November 2020). Supporting findability of COVID-19 research with large-scale text mining of scientific publications [Poster presentation]. International FAIR Convergence Symposium. doi:10.5281/zenodo.4300199

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