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PFAU Thomas

Main Referenced Co-authors
SAUTER, Thomas  (5)
Ebenhöh, Oliver (3)
CHRISTIAN, Nils  (2)
PIRES PACHECO, Maria Irene  (2)
Adlakha, Nidhi (1)
Main Referenced Keywords
constraint based modelling (2); 2,3-Butanediol (1); benchmarking (1); Constraint Based Modelling (1); constraint-based modeling (1);
Main Referenced Disciplines
Life sciences: Multidisciplinary, general & others (5)
Computer science (2)
Phytobiology (plant sciences, forestry, mycology...) (2)
Engineering, computing & technology: Multidisciplinary, general & others (1)
Biochemistry, biophysics & molecular biology (1)

Publications (total 9)

The most downloaded
882 downloads
PFAU, T. (2013). Modelling Metabolic Interactions in the Legume-Rhizobia Symbiosis [Doctoral thesis, University of Aberdeen]. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/22073 https://hdl.handle.net/10993/22073

The most cited

1097 citations (OpenAlex)

HEIRENDT, L., Arreckx, S., PFAU, T., Mendoza, S. N., Richelle, A., Heinken, A. K., Haraldsdottir, H. S., Wachowiak, J., Keating, S. M., VLASOV, V., Magnusdottir, S., Ng, C. Y., Preciat, G., ZAGARE, A., Chan, S. H. J., Aurich, M. K., Clancy, C. M., Modamio, J., Sauls, J. T., ... Fleming, R. M. T. (2019). Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0. Nature Protocols, 14 (3), 639-702. doi:10.1038/s41596-018-0098-2 https://hdl.handle.net/10993/39264

HEIRENDT, L., Arreckx, S., PFAU, T., Mendoza, S. N., Richelle, A., Heinken, A. K., Haraldsdottir, H. S., Wachowiak, J., Keating, S. M., VLASOV, V., Magnusdottir, S., Ng, C. Y., Preciat, G., ZAGARE, A., Chan, S. H. J., Aurich, M. K., Clancy, C. M., Modamio, J., Sauls, J. T., ... Fleming, R. M. T. (2019). Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0. Nature Protocols, 14 (3), 639-702. doi:10.1038/s41596-018-0098-2
Peer Reviewed verified by ORBi

CECCHINI, V. F., NGUYEN, T.-P., PFAU, T., DE LANDTSHEER, S., & SAUTER, T. (2019). An Efficient Machine Learning Method to Solve Imbalanced Data in Metabolic Disease Prediction. In V. F. CECCHINI, An Efficient Machine Learning Method to Solve Imbalanced Data in Metabolic Disease Prediction (1st ed, pp. 5). Da Nang, Vietnam: DA NANG PUBLISHING HOUSE.
Peer reviewed

PFAU, T., CHRISTIAN, N., Masakapalli, S. K., Sweetlove, L. J., Poolman, M. G., & Ebenhöh, O. (21 August 2018). The intertwined metabolism during symbiotic nitrogen fixation elucidated by metabolic modelling. Scientific Reports, 8. doi:10.1038/s41598-018-30884-x
Peer Reviewed verified by ORBi

PACHECO, M., PFAU, T., & SAUTER, T. (2016). Benchmarking procedures for high-throughput context specific reconstruction algorithms. Frontiers in Physiology. doi:10.3389/fphys.2015.00410
Peer Reviewed verified by ORBi

MARTINS CONDE, P., SAUTER, T., & PFAU, T. (2016). Constraint based modelling going multicellular. Frontiers in Molecular Biosciences, 3 (3). doi:10.3389/fmolb.2016.00003
Peer Reviewed verified by ORBi

Adlakha, N.* , PFAU, T.* , Ebenhöh, O., & Yazdani, S. S. (25 September 2015). Insight into metabolic pathways of the potential biofuel producer, Paenibacillus polymyxa ICGEB2008. Biotechnology for Biofuels, 8 (159). doi:10.1186/s13068-015-0338-4
Peer Reviewed verified by ORBi
* These authors have contributed equally to this work.

PFAU, T., PACHECO, M., & SAUTER, T. (2015). Towards improved genome-scale metabolic network reconstructions: unification, transcript specificity and beyond. Briefings in Bioinformatics. doi:10.1093/bib/bbv100
Peer Reviewed verified by ORBi

PFAU, T. (2013). Modelling Metabolic Interactions in the Legume-Rhizobia Symbiosis [Doctoral thesis, University of Aberdeen]. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/22073

PFAU, T., CHRISTIAN, N., & Ebenhöh, O. (2011). Systems approaches to modelling pathways and networks. Briefings in Functional Genomics, 10 (5), 266-279. doi:10.1093/bfgp/elr022
Peer reviewed

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