Alzheimer's disease; tauopathy; THY-Tau22 mouse model; sex differences; age differences; single-cell RNA sequencing; transcriptomics
Abstract :
[en] Background: Tauopathies, including Alzheimer's disease (AD) and frontotemporal dementia (FTD), display sex-specific differences in prevalence and progression, but the underlying molecular mechanisms remain unclear. Single-cell transcriptomic analysis of animal models can reveal how AD pathology affects different cell types across sex and age.
Objective: To understand sex-specific and sex-dimorphic transcriptomic changes in different cell types and their age-dependence in the THY-Tau22 mouse model of AD-linked tauopathy.
Methods: We applied single-cell RNA sequencing (scRNA-seq) to cortical tissue from male and female THY-Tau22 and wild-type mice at 17 months of age, when they had prominent tau inclusion pathology, and compared the results with corresponding data previously obtained at 7 months of age. Using differential statistical analysis for individual genes, pathways, and gene regulatory networks, we identified sex-specific, sex-dimorphic, and sex-neutral changes, and looked at how they evolved over age. To validate the most robust findings across distinct mouse models and species, the results were compared with cortical scRNA-seq data from the transgenic hAPP-based Tg2576 mouse model and human AD.
Results: We identified several significant sex-specific and sex-dimorphic differentially expressed genes in neurons, microglia, astrocytes and oligodendrocytes, including both cross-sectional changes and alterations from 7 months to 17 months of age. Key pathways affected in a sex-dependent manner across age included neurotransmitter signaling, RNA processing and splicing, stress response pathways, and protein degradation pathways. In addition, network analysis revealed the AD-associated genes Clu, Mbp, Fos and Junb as relevant regulatory hubs. Analysis of age-dependent changes highlighted genes and pathways associated with inflammatory response (Malat1, Cx3cr1), protein homeostasis (Cst3), and myelin maintenance (Plp1, Cldn11, Mal), that showed consistent sex-dependent changes as the THY-Tau22 mice aged. Multiple genes with established implications in AD, including the long non-coding RNA gene Malat1, displayed concordant sex-specific changes in mouse models and human AD.
Conclusions: This study provides a comprehensive single-cell transcriptomic characterization of sex-linked and age-dependent changes in the THY-Tau22 tauopathy model, revealing new insights into the interplay between age-dependent AD-like pathologies and sex. The identified sex-specific changes and their conservation across models and human AD highlight molecular targets for further preclinical investigation of sex-specific therapeutic strategies in AD.
Research center :
Luxembourg Centre for Systems Biomedicine (LCSB): Biomedical Data Science (Glaab Group)
Disciplines :
Neurology Human health sciences: Multidisciplinary, general & others Biotechnology Life sciences: Multidisciplinary, general & others
Author, co-author :
Ali, Muhammad
Garcia, Pierre
Lunkes, Laetitia P.
Sciortino, Alessia
Thomas, Melanie
Heurtaux, Tony
Grzyb, Kamil
Halder, Rashi
Skupin, Alex
Buée, Luc
Blum, David
Buttini, Manuel
GLAAB, Enrico ; University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB) > Biomedical Data Science
Temporal Transcriptomic Changes in the THY-Tau22 Mouse Model of Tauopathy Display Cell Type- and Sex-Specific Differences
Publication date :
2025
Journal title :
Acta Neuropathologica Communications
eISSN :
2051-5960
Volume :
in press
Peer reviewed :
Peer Reviewed verified by ORBi
Focus Area :
Systems Biomedicine
Development Goals :
3. Good health and well-being
FnR Project :
FNR17027921 - PreDYT - Predictive Biomarkers In Dystonia: Defining The Paradigm Of Monogenic Dystonia To Implement The Diagnosis And Prognosis Of Undiagnosed Forms, 2022 (01/07/2023-30/06/2026) - Enrico Glaab
H.M. Snyder S. Asthana L. Bain R. Brinton S. Craft D.B. Dubal et al. Sex biology contributions to vulnerability to Alzheimer’s disease: A think tank convened by the women’s Alzheimer’s research initiative Alzheimers Dement 12 1186 1196 10.1016/j.jalz.2016.08.004 27692800
J.B. Schwartz S. Weintraub Treatment for alzheimer Disease—Sex and gender effects need to be explicitly analyzed and reported in clinical trials JAMA Netw Open 4 e2124386 10.1001/jamanetworkopen.2021.24386 34515788
J.R. Filon A.J. Intorcia L.I. Sue E. Vazquez Arreola J. Wilson K.J. Davis et al. Gender differences in alzheimer disease: brain atrophy, histopathology burden, and cognition J Neuropathol Exp Neurol 75 748 754 10.1093/jnen/nlw047 27297671 7299435
D.B. Dubal Sex difference in Alzheimer’s disease: an updated, balanced and emerging perspective on differing vulnerabilities Handb Clin Neurol 175 261 273 10.1016/B978-0-444-64123-6.00018-7 33008530
R. Ossenkoppele C.H. Lyoo J. Jester-Broms C.H. Sudre H. Cho Y.H. Ryu et al. Assessment of demographic, genetic, and imaging variables associated with brain resilience and cognitive resilience to pathological Tau in patients with alzheimer disease JAMA Neurol 77 632 10.1001/jamaneurol.2019.5154 32091549
S. Miramontes C. Pereda Serras S.R. Woldemariam U. Khan Y. Li A.S. Tang et al. Alzheimer’s disease as a women’s health challenge: a call for action on integrative precision medicine approaches Npj Womens Health 2 17 1:STN:280:DC%2BB1cfit1WjtA%3D%3D 10.1038/s44294-024-00021-3 38778871 11106001
M. Rosende-Roca C. Abdelnour E. Esteban J.P. Tartari E. Alarcon J. Martínez-Atienza et al. The role of sex and gender in the selection of alzheimer patients for clinical trial pre-screening Alzheimers Res Ther 13 95 10.1186/s13195-021-00833-4 33952308 8098013
H. Mathys J. Davila-Velderrain Z. Peng F. Gao S. Mohammadi J.Z. Young et al. Single-cell transcriptomic analysis of Alzheimer’s disease Nature 570 332 337 1:CAS:528:DC%2BC1MXhtVajsrjI 10.1038/s41586-019-1195-2 31042697 6865822
A. Grubman G. Chew J.F. Ouyang G. Sun X.Y. Choo C. McLean et al. A single-cell atlas of entorhinal cortex from individuals with Alzheimer’s disease reveals cell-type-specific gene expression regulation Nat Neurosci 22 2087 2097 1:CAS:528:DC%2BC1MXit1Ohs7zF 10.1038/s41593-019-0539-4 31768052
H. Keren-Shaul A. Spinrad A. Weiner O. Matcovitch-Natan R. Dvir-Szternfeld T.K. Ulland et al. A unique microglia type associated with restricting development of Alzheimer’s disease Cell 169 1276 1290e17 1:CAS:528:DC%2BC2sXpslCqtbY%3D 10.1016/j.cell.2017.05.018 28602351
M. Ali O.U. Huarte T. Heurtaux P. Garcia B.P. Rodriguez K. Grzyb et al. Single-Cell transcriptional profiling and gene regulatory network modeling in Tg2576 mice reveal Gender-Dependent molecular features preceding Alzheimer-Like pathologies Mol Neurobiol 10.1007/S12035-022-02985-2 35980567 10861719
M. Ali P. Garcia L.P. Lunkes A. Sciortino M. Thomas T. Heurtaux et al. Single cell transcriptome analysis of the THY-Tau22 mouse model of Alzheimer’s disease reveals sex-dependent dysregulations Cell Death Discov 10 119 1:CAS:528:DC%2BB2cXmt1ClsLg%3D 10.1038/s41420-024-01885-9 38453894 10920792
K. Yu K.R. Yao M.A. Aguinaga J.M. Choquette C. Liu Y. Wang et al. G272V and P301L mutations induce isoform specific Tau mislocalization to dendritic spines and synaptic dysfunctions in cellular models of 3R and 4R Tau frontotemporal dementia J Neurosci 44 e1215232024 1:CAS:528:DC%2BB2cXitlGgs7bL 10.1523/JNEUROSCI.1215-23.2024 38858079 11236579
K. Schindowski A. Bretteville K. Leroy S. Bégard J.P. Brion M. Hamdane et al. Alzheimer’s disease-like Tau neuropathology leads to memory deficits and loss of functional synapses in a novel mutated Tau Transgenic mouse without any motor deficits Am J Pathol 169 599 616 1:CAS:528:DC%2BD28XosFaksr0%3D 10.2353/ajpath.2006.060002 16877359 1698785
M.-A. Burlot J. Braudeau K. Michaelsen-Preusse B. Potier S. Ayciriex J. Varin et al. Cholesterol 24-hydroxylase defect is implicated in memory impairments associated with Alzheimer-like Tau pathology Hum Mol Genet 24 5965 5976 1:CAS:528:DC%2BC2MXitV2hs73O 10.1093/hmg/ddv268 26358780
T. Bussière F. Bard R. Barbour H. Grajeda T. Guido K. Khan et al. Morphological characterization of Thioflavin-S-positive amyloid plaques in Transgenic alzheimer mice and effect of passive Abeta immunotherapy on their clearance Am J Pathol 165 987 995 10.1016/s0002-9440(10)63360-3 15331422 1618604
L. McInnes J. Healy N. Saul L. Großberger UMAP: uniform manifold approximation and projection J Open Source Softw 3 861 10.21105/joss.00861
X. Zhu J. Zhang Y. Xu J. Wang X. Peng H.-D. Li Single-Cell clustering based on shared nearest neighbor and graph partitioning Interdiscip Sci Comput Life Sci 12 117 130 1:CAS:528:DC%2BB3cXlslyksL4%3D 10.1007/s12539-019-00357-4
A. Ianevski A.K. Giri T. Aittokallio Fully-automated and ultra-fast cell-type identification using specific marker combinations from single-cell transcriptomic data Nat Commun 13 1246 1:CAS:528:DC%2BB38XmvVyisL8%3D 10.1038/s41467-022-28803-w 35273156 8913782
X. Zhang Y. Lan J. Xu F. Quan E. Zhao C. Deng et al. CellMarker: A manually curated resource of cell markers in human and mouse Nucleic Acids Res 47 D721 D728 1:CAS:528:DC%2BC1MXhs1Clu77E 10.1093/nar/gky900 30289549
O. Franzén L.-M. Gan J.L.M. Björkegren PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data Database J Biol Databases Curation 2019 baz046 1:CAS:528:DC%2BC1MXhvVSqurjF 10.1093/database/baz046
A. Butler P. Hoffman P. Smibert E. Papalexi R. Satija Integrating single-cell transcriptomic data across different conditions, technologies, and species Nat Biotechnol 36 411 420 1:CAS:528:DC%2BC1cXmslKrtL0%3D 10.1038/nbt.4096 29608179 6700744
C. Gao C. Chen T. Akyol A. Dusa G. Yu B. Cao et al. GgVennDiagram: intuitive Venn diagram software extended iMeta 3 e177 1:CAS:528:DC%2BB2MXpvFGnu74%3D 10.1002/imt2.177 38868514 10989133
Wu T, Hu E, Xu S, Chen M, Guo P, Dai Z et al (2021) ClusterProfiler 4.0: A universal enrichment tool for interpreting omics data. Innovation (China) 2. https://doi.org/10.1016/j.xinn.2021.100141
S. Zickenrott V.E. Angarica B.B. Upadhyaya A. Del Sol Prediction of disease-gene-drug relationships following a differential network analysis Cell Death Dis 10.1038/cddis.2015.393 26775695 4816176
C.B. Wiese Z.W. Agle P. Zhang K. Reue Chromosomal and gonadal sex drive sex differences in lipids and hepatic gene expression in response to hypercholesterolemia and Statin treatment Biol Sex Differ 13 63 1:CAS:528:DC%2BB38XivVaqs77K 10.1186/s13293-022-00474-8 36333813 9636767
C.-D. Lu J.-K. Ma Z.-Y. Luo Q.-X. Tai P. Wang P.-P. Guan Transferrin is responsible for mediating the effects of iron ions on the regulation of anterior pharynx-defective-1α/β and presenilin 1 expression via PGE2 and PGD2 at the early stage of Alzheimer’s disease Aging 10 3117 3135 1:CAS:528:DC%2BC1MXitFGmtrnL 10.18632/aging.101615 30383537 6286844
J. Wen R. Lv H. Ma H. Shen C. He J. Wang et al. Zc3h13 regulates nuclear RNA m6A methylation and mouse embryonic stem cell Self-Renewal Mol Cell 69 1028 1038e6 1:CAS:528:DC%2BC1cXltVyhtbs%3D 10.1016/j.molcel.2018.02.015 29547716 5858226
V. Astillero-Lopez S. Villar-Conde M. Gonzalez-Rodriguez A. Flores-Cuadrado I. Ubeda-Banon D. Saiz-Sanchez et al. Proteomic analysis identifies HSP90AA1, PTK2B, and ANXA2 in the human entorhinal cortex in Alzheimer’s disease: potential role in synaptic homeostasis and Aβ pathology through microglial and astroglial cells Brain Pathol Zurich Switz 34 e13235 1:CAS:528:DC%2BB2cXislCls7w%3D 10.1111/bpa.13235
G. Kaur E. Levy Cystatin C in Alzheimer’s disease Front Mol Neurosci 5 79 1:CAS:528:DC%2BC38XhtVCqsbnE 10.3389/fnmol.2012.00079 22783166 3390601
X. Zhan G.C. Jickling B.P. Ander B. Stamova D. Liu P.F. Kao et al. Myelin basic protein associates with AβPP, Aβ1–42, and amyloid plaques in cortex of Alzheimer’s disease brain J Alzheimers Dis 44 1213 1229 1:CAS:528:DC%2BC2MXjtVaiu7c%3D 10.3233/JAD-142013 25697841 4422390
H. Liu X. Yi M. You H. Yang S. Zhang S. Huang et al. Bulk-RNA and single-nuclei RNA seq analyses reveal the role of lactate metabolism-related genes in Alzheimer’s disease Metab Brain Dis 39 1469 1480 1:CAS:528:DC%2BB2cXhvVGltLjK 10.1007/s11011-024-01396-7 39136807
X. Liu R. Che W. Liang Y. Zhang L. Wu C. Han et al. Clusterin transduces Alzheimer-risk signals to amyloidogenesis Signal Transduct Target Ther 7 325 1:CAS:528:DC%2BB3MXislOmsbfP 10.1038/s41392-022-01157-x 36138003 9499966
L.K. Smith Y. He J.-S. Park G. Bieri C.E. Snethlage K. Lin et al. β2-microglobulin is a systemic pro-aging factor that impairs cognitive function and neurogenesis Nat Med 21 932 937 1:CAS:528:DC%2BC2MXht1WltLnP 10.1038/nm.3898 26147761 4529371
H.D. Rickner L. Jiang R. Hong N.K. O’Neill C.A. Mojica B.J. Snyder et al. Single cell transcriptomic profiling of a neuron-astrocyte assembloid tauopathy model Nat Commun 13 6275 1:CAS:528:DC%2BB38XislWiurbL 10.1038/s41467-022-34005-1 36271092 9587045
S.A. Belonwu Y. Li D. Bunis A.A. Rao C.W. Solsberg A. Tang et al. Sex-Stratified Single-Cell RNA-Seq analysis identifies Sex-Specific and cell Type-Specific transcriptional responses in Alzheimer’s disease across two brain regions Mol Neurobiol 59 276 293 1:CAS:528:DC%2BB3MXit1yktbrM 10.1007/s12035-021-02591-8 34669146
E. Bok E. Leem B.-R. Lee J.M. Lee C.J. Yoo E.M. Lee et al. Role of the lipid membrane and membrane proteins in Tau pathology Front Cell Dev Biol 9 653815 10.3389/fcell.2021.653815 33996814 8119898
G. Bartzokis T.A. Tishler P.H. Lu P. Villablanca L.L. Altshuler M. Carter et al. Brain ferritin iron May influence age- and gender-related risks of neurodegeneration Neurobiol Aging 28 414 423 1:CAS:528:DC%2BD2sXhtlant7w%3D 10.1016/j.neurobiolaging.2006.02.005 16563566
D.J. Apicco C. Zhang B. Maziuk L. Jiang H.I. Ballance S. Boudeau et al. Dysregulation of RNA splicing in tauopathies Cell Rep 29 4377 4388e4 1:CAS:528:DC%2BC1MXisVyrurjF 10.1016/j.celrep.2019.11.093 31875547 6941411
R.K. Leak Heat shock proteins in neurodegenerative disorders and aging J Cell Commun Signal 8 293 310 10.1007/s12079-014-0243-9 25208934 4390795
J. Oltra C. Uribe A. Campabadal A. Inguanzo G.C. Monté-Rubio M.J. Martí et al. Sex differences in brain and cognition in de Novo Parkinson’s disease Front Aging Neurosci 13 791532 10.3389/fnagi.2021.791532 35069180 8770804
M. DuMont A. Agostinis K. Singh E. Swan Y. Buttle D. Tropea Sex representation in neurodegenerative and psychiatric disorders’ preclinical and clinical studies Neurobiol Dis 184 106214 1:CAS:528:DC%2BB3sXhsVGjsbvM 10.1016/j.nbd.2023.106214 37385457
K.R. Laws K. Irvine T.M. Gale Sex differences in Alzheimer’s disease Curr Opin Psychiatry 31 133 139 10.1097/YCO.0000000000000401 29324460
Johnson NR, Yuan P, Castillo E, Lopez TP, Yue W, Bond A et al (2021) CSF1R inhibitor levels determine sex-specific phenotype of resilient microglia and neurofunctional rescue leading to extended survival in tauopathy mice. Neuroscience. https://doi.org/10.1101/2021.03.20.436288
M.T. Heneka M.J. Carson J.E. Khoury G.E. Landreth F. Brosseron D.L. Feinstein et al. Neuroinflammation in Alzheimer’s disease Lancet Neurol 14 388 405 1:CAS:528:DC%2BC2MXkvVSksrw%3D 10.1016/S1474-4422(15)70016-5 25792098 5909703
L. Weinhard U. Neniskyte A. Vadisiute G. Di Bartolomei N. Aygün L. Riviere et al. Sexual dimorphism of microglia and synapses during mouse postnatal development Dev Neurobiol 78 618 626 10.1002/dneu.22568 29239126 6001780
M. Bordeleau M. Carrier G.N. Luheshi M.-È. Tremblay Microglia along sex lines: from brain colonization, maturation and function, to implication in neurodevelopmental disorders Semin Cell Dev Biol 94 152 163 10.1016/j.semcdb.2019.06.001 31201858
S.M. Meadows F. Palaguachi M.W. Jang A. Licht-Murava D. Barnett T.S. Zimmer et al. Hippocampal astrocytes induce sex-dimorphic effects on memory Cell Rep 43 114278 1:CAS:528:DC%2BB2cXhtFGjtrjL 10.1016/j.celrep.2024.114278 38795347 11234507
N.K. Thomaz L.D. Bobermin A. Quincozes-Santos Sexual dimorphism and hypothalamic astrocytes: focus on glioprotection Neuroglia 5 274 288 10.3390/neuroglia5030019
F. Sciarra F. Campolo E. Franceschini F. Carlomagno M. Venneri Gender-Specific impact of sex hormones on the immune system Int J Mol Sci 24 6302 1:CAS:528:DC%2BB3sXotVKhur0%3D 10.3390/ijms24076302 37047274 10094624
M. Liu E.A. Oyarzabal R. Yang S.J. Murphy P.D. Hurn A novel method for assessing sex-specific and genotype-specific response to injury in astrocyte culture J Neurosci Methods 171 214 217 1:CAS:528:DC%2BD1cXmtVajsbo%3D 10.1016/j.jneumeth.2008.03.002 18436308 2701697
S.E. Nasrabady B. Rizvi J.E. Goldman A.M. Brickman White matter changes in Alzheimer’s disease: a focus on Myelin and oligodendrocytes Acta Neuropathol Commun 6 22 1:CAS:528:DC%2BC1cXit1ans7zN 10.1186/s40478-018-0515-3 29499767 5834839
T.M. Sivanandam M.K. Thakur Amyloid precursor protein (APP) mRNA level is higher in the old mouse cerebral cortex and is regulated by sex steroids J Mol Neurosci 43 235 240 1:CAS:528:DC%2BC3MXit1Kitb4%3D 10.1007/s12031-010-9402-5 20563761
K. Govindpani L.G. McNamara N.R. Smith C. Vinnakota H.J. Waldvogel R.L. Faull et al. Vascular dysfunction in Alzheimer’s disease: A prelude to the pathological process or a consequence of it?? J Clin Med 8 651 1:CAS:528:DC%2BB3cXhvF2qsrY%3D 10.3390/jcm8050651 31083442 6571853
A.C. Tecalco–Cruz J. Pedraza-Chaverri A. Briones-Herrera E. Cruz-Ramos L. López–Canovas J. Zepeda–Cervantes Protein degradation-associated mechanisms that are affected in Alzheimer´s disease Mol Cell Biochem 477 915 925 1:CAS:528:DC%2BB38XitFGlsbc%3D 10.1007/s11010-021-04334-8 35083609
B.F. Osborne A. Turano J.M. Schwarz Sex differences in the neuroimmune system Curr Opin Behav Sci 23 118 123 10.1016/j.cobeha.2018.05.007 30014014 6044467
C.C. Boyle S.W. Cole N.I. Eisenberger R. Olmstead E.C. Breen M.R. Irwin Sex differences in the transcriptional response to acute inflammatory challenge: A randomized controlled trial of endotoxin Brain Behav Immun - Health 40 100840 1:CAS:528:DC%2BB2cXhsl2jtL%2FI 10.1016/j.bbih.2024.100840 39252981 11381881
S. Salcher I. Heidegger G. Untergasser G. Fotakis A. Scheiber A. Martowicz et al. Comparative analysis of 10X chromium vs. BD Rhapsody whole transcriptome single-cell sequencing technologies in complex human tissues Heliyon 10 e28358 1:CAS:528:DC%2BB2cXhtVCiu7rN 10.1016/j.heliyon.2024.e28358 38689972 11059509
G. Eyal M.B. Verhoog G. Testa-Silva Y. Deitcher J.C. Lodder R. Benavides-Piccione et al. Unique membrane properties and enhanced signal processing in human neocortical neurons eLife 5 e16553 1:CAS:528:DC%2BC1cXptVegt78%3D 10.7554/eLife.16553 27710767 5100995
A.M.M. Sousa K.A. Meyer G. Santpere F.O. Gulden N. Sestan Evolution of the human nervous system function, structure, and development Cell 170 226 247 1:CAS:528:DC%2BC2sXhtFygtbzF 10.1016/j.cell.2017.06.036 28708995 5647789
A.A. Galakhova S. Hunt R. Wilbers D.B. Heyer C.P.J. de Kock H.D. Mansvelder et al. Evolution of cortical neurons supporting human cognition Trends Cogn Sci 26 909 922 1:STN:280:DC%2BB287mvVKjuw%3D%3D 10.1016/j.tics.2022.08.012 36117080 9561064
E.G. Jones The origins of cortical interneurons: mouse versus monkey and human Cereb Cortex N Y N 1991 19 1953 1956 10.1093/cercor/bhp088
the Alzheimer’s Disease Neuroimaging Initiative J.W. Vogel A.L. Young N.P. Oxtoby R. Smith R. Ossenkoppele et al. Four distinct trajectories of Tau deposition identified in Alzheimer’s disease Nat Med 27 871 881 1:CAS:528:DC%2BB3MXhtVSqsbrJ 10.1038/s41591-021-01309-6
S. Do Carmo G. Crynen T. Paradis J. Reed M.F. Iulita A. Ducatenzeiler et al. Hippocampal proteomic analysis reveals distinct pathway deregulation profiles at early and late stages in a rat model of Alzheimer’s-Like amyloid pathology Mol Neurobiol 55 3451 3476 1:CAS:528:DC%2BC2sXnslKktLs%3D 10.1007/s12035-017-0580-9 28502044
S. Merlo S.F. Spampinato M.A. Sortino Early compensatory responses against neuronal injury: A new therapeutic window of opportunity for Alzheimer’s disease?? CNS Neurosci Ther 25 5 13 1:CAS:528:DC%2BC1cXis1WitLvF 10.1111/cns.13050 30101571
M.M. Khan M. Tripathi J. Xiao Long noncoding RNA MALAT1; A novel and potential therapeutic target for Alzheimer’s disease Alzheimers Dement 19 e075871 10.1002/alz.075871
W. Xiao R. Halabi C.-H. Lin M. Nazim K.-H. Yeom D.L. Black The LncRNA Malat1 is trafficked to the cytoplasm as a localized mRNA encoding a small peptide in neurons Genes Dev 38 294 307 1:CAS:528:DC%2BB2cXitFGgu7bM 10.1101/gad.351557.124 38688681 11146593
Z. Huang J.D. Jordan Q. Zhang Myelin pathology in Alzheimer’s disease: potential therapeutic opportunities Aging Dis 15 698 10.14336/AD.2023.0628 37548935 10917545
J.-F. Chen K. Liu B. Hu R.-R. Li W. Xin H. Chen et al. Enhancing Myelin renewal reverses cognitive dysfunction in a murine model of Alzheimer’s disease Neuron 109 2292 2307e5 1:CAS:528:DC%2BB3MXhtlSrtbzO 10.1016/j.neuron.2021.05.012 34102111 8298291
S. Cohen P.J. Gianaros S.B. Manuck A stage model of stress and disease Perspect Psychol Sci 11 456 463 10.1177/1745691616646305 27474134 5647867
M.P. Mattson W.A. Pedersen W. Duan C. Culmsee S. Camandola Cellular and molecular mechanisms underlying perturbed energy metabolism and neuronal degeneration in Alzheimer’s and Parkinson’s diseases Ann N Y Acad Sci 893 154 175 1:CAS:528:DC%2BD3cXms1Gntw%3D%3D 10.1111/j.1749-6632.1999.tb07824.x 10672236
B. Frost Alzheimer’s disease and related tauopathies: disorders of disrupted neuronal identity Trends Neurosci 46 797 813 1:CAS:528:DC%2BB3sXhs1Ght73L 10.1016/j.tins.2023.07.006 37591720 10528597
M. Ximerakis S.L. Lipnick B.T. Innes S.K. Simmons X. Adiconis D. Dionne et al. Single-cell transcriptomic profiling of the aging mouse brain Nat Neurosci 22 1696 1708 1:CAS:528:DC%2BC1MXhvVCmt7vK 10.1038/s41593-019-0491-3 31551601
B.A. Benayoun E.A. Pollina P.P. Singh S. Mahmoudi I. Harel K.M. Casey et al. Remodeling of epigenome and transcriptome landscapes with aging in mice reveals widespread induction of inflammatory responses Genome Res 29 697 709 1:CAS:528:DC%2BC1MXnslylurg%3D 10.1101/gr.240093.118 30858345 6442391
C.A. Mangold B. Wronowski M. Du D.R. Masser N. Hadad G.V. Bixler et al. Sexually divergent induction of microglial-associated neuroinflammation with hippocampal aging J Neuroinflammation 14 141 1:CAS:528:DC%2BC1cXitV2gsrnO 10.1186/s12974-017-0920-8 28732515 5521082
H. Kim Y. Kim C.-Y. Lee D.-G. Kim M. Cheon Investigation of early molecular alterations in tauopathy with generative adversarial networks Sci Rep 13 732 1:CAS:528:DC%2BB3sXhtFSjsr0%3D 10.1038/s41598-023-28081-6 36639689 9839697
I. Castanho T.K. Murray E. Hannon A. Jeffries E. Walker E. Laing et al. Transcriptional signatures of Tau and amyloid neuropathology Cell Rep 30 2040 2054e5 1:CAS:528:DC%2BB3cXotFektbw%3D 10.1016/j.celrep.2020.01.063 32049030 7016505
M. Soudy S.L. Bars E. Glaab Sex-dependent molecular landscape of Alzheimer’s disease revealed by large‐scale single‐cell transcriptomics Alzheimers Dement 21 e14476 1:CAS:528:DC%2BB2MXhtVSqsrc%3D 10.1002/alz.14476 39737748
M.B. Koopman S.G.D. Rüdiger Alzheimer cells on their way to derailment show selective changes in protein quality control network Front Mol Biosci 7 214 1:CAS:528:DC%2BB3MXlsVWktbs%3D 10.3389/fmolb.2020.00214 33330614 7715003
R.D. Escarcega M. VK MJ V.E. Kyriakopoulos G.J. Ortiz A.M. Gusdon H. Fan et al. Serum metabolome profiling in patients with mild cognitive impairment reveals sex differences in lipid metabolism Neurobiol Dis 204 106747 1:CAS:528:DC%2BB2cXivVWqtrzK 10.1016/j.nbd.2024.106747 39617329
M. Zaręba-Kozioł A. Bartkowiak-Kaczmarek M. Roszkowska K. Bijata I. Figiel A.K. Halder et al. S-Palmitoylation of synaptic proteins as a novel mechanism underlying Sex-Dependent differences in neuronal plasticity Int J Mol Sci 22 6253 1:CAS:528:DC%2BB3MXhslCltbvN 10.3390/ijms22126253 34200797 8230572
C. Cheignon M. Tomas D. Bonnefont-Rousselot P. Faller C. Hureau F. Collin Oxidative stress and the amyloid beta peptide in Alzheimer’s disease Redox Biol 14 450 464 1:CAS:528:DC%2BC2sXhslans73L 10.1016/j.redox.2017.10.014 29080524
H. Fanlo-Ucar P. Picón-Pagès V. Herrera-Fernández G. ILL-Raga F.J. Muñoz The dual role of amyloid Beta-Peptide in oxidative stress and inflammation: unveiling their connections in Alzheimer’s disease etiopathology Antioxidants 13 1208 1:CAS:528:DC%2BB2cXitlGgurnO 10.3390/antiox13101208 39456461 11505517
N. Palihati Y. Tang Y. Yin D. Yu G. Liu Z. Quan et al. Clusterin is a potential therapeutic target in Alzheimer’s disease Mol Neurobiol 61 3836 3850 1:CAS:528:DC%2BB3sXisVOrsbbL 10.1007/s12035-023-03801-1 38017342
T. Shahin D. Mayr M.R. Shoeb H.S. Kuehn B. Hoeger S. Giuliani et al. Identification of germline monoallelic mutations in IKZF2 in patients with immune dysregulation Blood Adv 6 2444 2451 1:CAS:528:DC%2BB38XhtlGitrnL 10.1182/bloodadvances.2021006367 34920454 9006292
L. Dai Y. Shen Insights into T-cell dysfunction in Alzheimer’s disease Aging Cell 20 e13511 1:CAS:528:DC%2BB3MXitlykur%2FP 10.1111/acel.13511 34725916 8672785
Cheng Z, Zou X, Jin Y, Gao S, Lv J, Li B et al (2018) The role of KLF4 in Alzheimer’s disease. Front Cell Neurosci 12. https://doi.org/10.3389/fncel.2018.00325
Y.T. Hu X.L. Chen S.H. Huang Q.B. Zhu S.Y. Yu Y. Shen et al. Early growth response-1 regulates acetylcholinesterase and its relation with the course of Alzheimer’s disease Brain Pathol 10.1111/bpa.12688 31609499 7780370
X. Lou S. Sun W. Chen Y. Zhou Y. Huang X. Liu et al. Negative feedback regulation of NF-κB action by CITED2 in the nucleus J Immunol Baltim Md 1950 186 539 548 1:CAS:528:DC%2BC3cXhs1ajtLnM 10.4049/jimmunol.1001650
S. Wang D. Ren B. Arkoun A.-L. Kaushik G. Matherat Y. Lécluse et al. Lyl-1 regulates primitive macrophages and microglia development Commun Biol 4 1382 1:CAS:528:DC%2BB38XmvVOjur8%3D 10.1038/s42003-021-02886-5 34887504 8660792