Other (Scientific journals)
Adhesive water networks facilitate binding of protein interfaces
Ahmad, Mazen; GU, Wei; Geyer, Tihamer et al.
2011In Nature Communications, 2
Peer Reviewed verified by ORBi
 

Files


Full Text
ncomms1258.pdf
Publisher postprint (681.17 kB)
Request a copy

All documents in ORBilu are protected by a user license.

Send to



Details



Abstract :
[en] Water structure has an essential role in biological assembly. Hydrophobic dewetting has been documented as a general mechanism for the assembly of hydrophobic surfaces; however, the association mechanism of hydrophilic interfaces remains mysterious and cannot be explained by simple continuum water models that ignore the solvent structure. Here we study the association of two hydrophilic proteins using unbiased extensive molecular dynamics simulations that reproducibly recovered the native bound complex. The water in the interfacial gap forms an adhesive hydrogen-bond network between the interfaces stabilizing early intermediates before native contacts are formed. Furthermore, the interfacial gap solvent showed a reduced dielectric shielding up to distances of few nanometres during the diffusive phase. The interfacial gap solvent generates an anisotropic dielectric shielding with a strongly preferred directionality for the electrostatic interactions along the association direction.
Disciplines :
Physical, chemical, mathematical & earth Sciences: Multidisciplinary, general & others
Author, co-author :
Ahmad, Mazen
GU, Wei 
Geyer, Tihamer
Helms, Volkhard
Language :
English
Title :
Adhesive water networks facilitate binding of protein interfaces
Publication date :
2011
Journal title :
Nature Communications
eISSN :
2041-1723
Publisher :
Nature Pub.lishing Group, London, United Kingdom
Volume :
2
Peer reviewed :
Peer Reviewed verified by ORBi
Available on ORBilu :
since 09 July 2013

Statistics


Number of views
128 (2 by Unilu)
Number of downloads
0 (0 by Unilu)

Scopus citations®
 
127
Scopus citations®
without self-citations
124
OpenCitations
 
119
OpenAlex citations
 
151
WoS citations
 
121

Mendeley (156)
CiteULike (3)
publications
0
supporting
0
mentioning
0
contrasting
0
Smart Citations
0
0
0
0
Citing PublicationsSupportingMentioningContrasting
View Citations

See how this article has been cited at scite.ai

scite shows how a scientific paper has been cited by providing the context of the citation, a classification describing whether it supports, mentions, or contrasts the cited claim, and a label indicating in which section the citation was made.

Bibliography


Similar publications



Contact ORBilu