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Training an asymmetric signal perceptron through reinforcement in an artificial chemistry
Banda, Peter; Teuscher, Christof; Stefanovic, Darko
2014In Journal of the Royal Society, Interface, 11 (93)
Peer reviewed
 

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Keywords :
chemical perceptron; representation asymmetry; reinforcement learning; mass-action kinetics; thresholding; robustness
Abstract :
[en] State-of-the-art biochemical systems for medical applications and chemical computing are application-specific and cannot be reprogrammed or trained once fabricated. The implementation of adaptive biochemical systems that would offer flexibility through programmability and autonomous adaptation faces major challenges because of the large number of required chemical species as well as the timing-sensitive feedback loops required for learning. In this paper, we begin addressing these challenges with a novel chemical perceptron that can solve all 14 linearly separable logic functions. The system performs asymmetric chemical arithmetic, learns through reinforcement and supports both Michaelis–Menten as well as mass-action kinetics. To enable cascading of the chemical perceptrons, we introduce thresholds that amplify the outputs. The simplicity of our model makes an actual wet implementation, in particular by DNA-strand displacement, possible.
Disciplines :
Chemistry
Computer science
Author, co-author :
Banda, Peter ;  Portland State University > Department of Computer Science
Teuscher, Christof
Stefanovic, Darko
External co-authors :
no
Language :
English
Title :
Training an asymmetric signal perceptron through reinforcement in an artificial chemistry
Publication date :
2014
Journal title :
Journal of the Royal Society, Interface
Publisher :
The Royal Society
Volume :
11
Issue :
93
Peer reviewed :
Peer reviewed
Focus Area :
Computational Sciences
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since 17 March 2016

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