Databases as Topic; Genome; Metabolic Networks and Pathways; Quality Control; Software; Systems Biology
Résumé :
[en] MOTIVATION: Genome-scale metabolic networks are widely used in systems biology. However, to date no freely available tool exists that ensures quality control during the reconstruction process. RESULTS: Here, we present a COBRA toolbox extension, rBioNet, enabling the construction of publication-level biochemical networks while enforcing necessary quality control measures. rBioNet has an intuitive user interface facilitating the reconstruction process for novices and experts. AVAILABILITY: The rBioNet is freely available from http://opencobra.sourceforge.net.
Disciplines :
Sciences du vivant: Multidisciplinaire, généralités & autres
