Article (Scientific journals)
rBioNet: A COBRA toolbox extension for reconstructing high-quality biochemical networks.
Thorleifsson, Stefan Gretar; Thiele, Ines
2011In Bioinformatics, 27 (14), p. 2009-10
Peer reviewed
 

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Keywords :
Databases as Topic; Genome; Metabolic Networks and Pathways; Quality Control; Software; Systems Biology
Abstract :
[en] MOTIVATION: Genome-scale metabolic networks are widely used in systems biology. However, to date no freely available tool exists that ensures quality control during the reconstruction process. RESULTS: Here, we present a COBRA toolbox extension, rBioNet, enabling the construction of publication-level biochemical networks while enforcing necessary quality control measures. rBioNet has an intuitive user interface facilitating the reconstruction process for novices and experts. AVAILABILITY: The rBioNet is freely available from http://opencobra.sourceforge.net.
Disciplines :
Life sciences: Multidisciplinary, general & others
Author, co-author :
Thorleifsson, Stefan Gretar
Thiele, Ines 
Language :
English
Title :
rBioNet: A COBRA toolbox extension for reconstructing high-quality biochemical networks.
Publication date :
2011
Journal title :
Bioinformatics
ISSN :
1367-4803
eISSN :
1367-4811
Volume :
27
Issue :
14
Pages :
2009-10
Peer reviewed :
Peer reviewed
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since 30 April 2014

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