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Bisdorff, R. (2020). Algorithmic Decision Theory: Lecture notes and presentation slides (Spring 2018, UUniversity of Luxembourg, MICS2 - 18 Algorithmic Decision Theory).
Hakami Zanjani, A. A., Reynolds, N., Zhang, A., Schilling, T., Mezzenga, R., & Berryman, J. (2020). Amyloid Evolution: Antiparallel Replaced by Parallel. Biophysical Journal, 118, 2526–2536.
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Chatron, N., Becker, F., Morsy, H., Schmidts, M., Hardies, K., Tuysuz, B., Roselli, S., Najafi, M., Alkaya, D. U., Ashrafzadeh, F., Nabil, A., Omar, T., Maroofian, R., Karimiani, E. G., Hussein, H., Kok, F., Ramos, L., Gunes, N., Bilguvar, K., Labalme, A., Alix, E., Sanlaville, D., De Bellescize, J., Poulat, A.-L., EuroEPINOMICS-RES consrtium AR working group, Moslemi, A.-R., Lerche, H., May, P., Lesca, G., Weckhuysen, S., & Tajsharghi, H. (2020, April 13). Bi-allelic GAD1 variants cause a neonatal onset syndromic developmental and epileptic encephalopathy. Brain: a Journal of Neurology.
Maldonado, A., Basdogan, Y., Berryman, J., Rempe, S., & Keith, J. (2020). First-principles modeling of chemistry in mixed solvents: Where to go from here? Journal of Chemical Physics, 152.
Lal, D., May, P., Perez-Palma, E., Samocha, K. E., Kosmicki, J. A., Robinson, E. B., Møller, R. S., Krause, R., Nürnberg, P., Weckhuysen, S., De Jonghe, P., Guerrini, R., Niestroj, L. M., Du, J., Marini, C., EuroEPINOMICS-RES Consortium, Ware, J. S., Kurki, M., Gormley, P., Tang, S., Wu, S., Biskup, S., Poduri, A., Neubauer, B. A., Koeleman, B. P. C., Helbig, K. L., Weber, Y. G., Helbig, I., Majitha, A. R., Palotie, A., & Daly, M. J. (2020). Gene family information facilitates variant interpretation and identification of disease-associated genes in neurodevelopmental disorders. Genome Medicine, 12(28).
Bobbili, D. R., Banda, P., Krüger, R., & May, P. (2020, February 13). Excess of singleton loss-of-function variants in Parkinson's disease contributes to genetic risk. Journal of Medical Genetics.
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Udovenko, A. (2020). Optimized Collision Search for STARK-Friendly Hash Challenge Candidates. Eprint/Working paper retrieved from http://orbi.ulg.ac.be/handle/10993/42379.
Olivares Pulido, G., Teferle, F. N., & Hunegnaw, A. (2020). Markov Chain Monte Carlo and the Application to Geodetic Time Series Analysis. In J.-P., Montillet & M., Bos, Geodetic Time Series Analysis in Earth Sciences (1st ed, pp. 53-138). Springer.
Bogusz, J., Hunegnaw, A., Teferle, F. N., & Klos, A. (2019, December 13). Using the Vertical Land Movement estimates from the IGS TIGA combined solution to derive Global Mean Sea Level changes. Paper presented at AGU Fall Meeting 2019, San Francisco, USA.
Teferle, F. N., Hunegnaw, A., Hibbert, A., Williams, S., Woodworth, P., Dalziel, I., Smalley, R. J., & Lawver, L. (2019, December 13). Consolidating Observation of Land and Sea Level Changes around South Georgia Island. Poster session presented at AGU Fall Meeting 2019, San Francisco, USA.
Varrette, S., Pinel, F., Kieffer, E., Danoy, G., & Bouvry, P. (2019). Automatic Software Tuning of Parallel Programs for Energy-Aware Executions. Proc. of 13th Intl. Conf. on Parallel Processing and Applied Mathematics (PPAM 2019). Bialystok, Poland: Springer Verlag.
Varrette, S., & Sulaiman, I. F. (2019). EU-ASEAN High Performance Computing (HPC) Study Expert Mapping of ASEAN policy orientations and related HPC research infrastructures. European Union - Enhanced Regional EU-ASEAN Dialogue Instrument" (E-READI).
Michelsen, A. N. B., Valiente, M., Zinner, N. T., & Negretti, A. (2019). Ion-induced interactions in a Tomonaga-Luttinger liquid. Physical Review. B, 100(20).
Hakami Zanjani, A. A., Reynolds, N., Zhang, A., Schilling, T., Mezzenga, R., & Berryman, J. (2019, November 05). Kinetic Control of Parallel versus Antiparallel Amyloid Aggregation via Shape of the Growing Aggregate. Nature Scientific Reports.
Gallego-Martinez, A., Requena, T., Roman-Naranjo, P., May, P., & Lopez-Escamez, J. A. (2019, September 07). Enrichment of damaging missense variants in genes related with axonal guidance signalling in sporadic Meniere’s disease. Journal of Medical Genetics.
Besseron, X., Pozzetti, G., Rousset, A., Mainassara Chekaraou, A. W., & Peters, B. (2019, June 21). High Performance Parallel Coupling of OpenFOAM+XDEM. Paper presented at UL HPC School - June 2019 - User Session, Luxembourg, Luxembourg.
Besseron, X. (2019, June 20). Short Introduction to the Roofline Model. Paper presented at UL HPC School - June 2019, Luxembourg, Luxembourg.
Bisdorff, R. (2019). Tutorials for using the Digraph3 Python software collection.
Bordas, S., & Natarajan, S. (2019, May 03). Displacement based polytopal elements a strain smoothing and scaled boundary approach. Paper presented at POEMS2019, Marseille, France.
Emeras, J., Varrette, S., Plugaru, V., & Bouvry, P. (2019). Amazon Elastic Compute Cloud (EC2) versus In-House HPC Platform: A Cost Analysis. IEEE Transactions on Cloud Computing, 7(2), 456-468.
Siekierska, A., Stamberger, H., Deconinck, T., Oprescu, S. N., Partoens, M., Sourbron, J., Zhang, Y., Adriaenssens, E., Mullen, P., Wiencek, P., Hardies, K., Lee, J.-S., Giong, H.-K., Distelmaier, F., Elpeleg, O., Helbig, K. L., Hersh, J., Isikay, S., Jordan, E., Karaca, E., Kecskes, A., Lupski, J. R., Kovacs-Nagy, R., May, P., Narayanan, V., Pendziwiat, M., Ramsey, K., Rangasamy, S., Shinde, D., Spiegel, R., Timmerman, V., Von Spiczak, S., Helbig, I., CARCD Research Group, EuroEPINOMICS RES AR working group, Balling, R., Weckhuysen, S., Francklyn, C., Antonellis, A., de Witte, P., & De Jonghe, P. (2019). Biallelic VARS variants cause developmental encephalopathy with microcephaly that is recapitulated in vars knockout zebrafish. Nature Communications, 10(1), 708.
Bouvry, P., Varrette, S., Wasim, M. U., Ibrahim, A. A. Z. A., Besseron, X., & Trinh, T. A. (2019). Security, reliability and regulation compliance in Ultrascale Computing System. In A. Y., Zomaya, J., Carretero (Ed.), & E., Jeannot (Ed.), Ultrascale Computing Systems (pp. 65-83). IET.
Oleksiak, A., Lefèvre, L., Alonso, P., Da Costa, G., De Maio, V., Frasheri, N., Garcia, V. M., Guerrero, J., Lafond, S., Lastovetsky, A. L., Manumachu, R. R., Muite, B., Orgerie, A.-C., Piatek, W., Pierson, J.-M., Prodan, R., Stolf, P., Sheme, E., & Varrette, S. (2019). Energy aware ultrascale systems. In J., Carretero, E., Jeannot, & A. Y., Zomaya (Eds.), Ultrascale Computing Systems (pp. 127-188). IET.
Orgerie, A.-C., & Varrette, S. (2019). A Full-Cost Model for Estimating the Energy Consumption of Computing Infrastructures. In A. Y., Zomaya, J., Carretero (Ed.), & E., Jeannot (Ed.), Ultrascale Computing Systems (pp. 161-176). IET.
Bernard, N., & Leprévost, F. (2019). How Evolutionary Algorithms and Information Hiding deceive machines and humans for image recognition: A research program. In T., Theeramunkong, P., Bouvry (Ed.), & P., Srichaikul (Ed.), Proceedings of the OLA'2019 International Conference on Optimization and Learning (Bangkok, Thailand, Jan 29-31, 2019). Springer.
Beullens, W., Beyne, T., Udovenko, A., & Vitto, G. (2019). Cryptanalysis of the Legendre PRF and generalizations. Eprint/Working paper retrieved from https://eprint.iacr.org/2019/1357.
Cappellini, E., Welker, F., Pandolfi, L., Ramos-Madrigal, J., Samodova, D., Ruther, P. L., Fotakis, A. K., Lyon, D., Moreno-Mayar, J. V., Bukhsianidze, M., Rakownikow Jersie-Christensen, R., Mackie, M., Ginolhac, A., Ferring, R., Tappen, M., Palkopoulou, E., Dickinson, M. R., Stafford, T. W. J., Chan, Y. L., Gotherstrom, A., Nathan, S. K. S. S., Heintzman, P. D., Kapp, J. D., Kirillova, I., Moodley, Y., Agusti, J., Kahlke, R.-D., Kiladze, G., Martinez-Navarro, B., Liu, S., Sandoval Velasco, M., Sinding, M.-H. S., Kelstrup, C. D., Allentoft, M. E., Orlando, L., Penkman, K., Shapiro, B., Rook, L., Dalen, L., Gilbert, M. T. P., Olsen, J. V., Lordkipanidze, D., & Willerslev, E. (2019). Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny. Nature.
Gerard, D., Schmidt, F., Ginolhac, A., Schmitz, M., Halder, R., Ebert, P., Schulz, M., Sauter, T., & Sinkkonen, L. (2018, December 14). Temporal enhancer profiling of parallel lineages identifies AHR and GLIS1 as regulators of mesenchymal multipotency. Nucleic Acids Research.
Linnartz-Gerlach, B., Bodea, L.-G., Klaus, C., Ginolhac, A., Halder, R., Sinkkonen, L., Walter, J., Colonna, M., & Neumann, H. (2018, December 11). TREM2 triggers microglial density and age‐related neuronal loss. Glia.
Hoja, J. (2018). First-Principles Modeling of Molecular Crystals: Crystal Structure Prediction and Vibrational Properties. Unpublished doctoral thesis, University of Luxembourg, ​​Luxembourg.
Gutbier, S., May, P., Berthelot, S., Krishna, A., Trefzer, T., Behbehani, M., Effremova, L., Delp, J., Gstraunthaler, G., Waldmann, T., & Leist, M. (2018, October 08). Major changes of cell function and toxicant sensitivity in cultured cells undergoing mild, quasi-natural genetic drift. Archives of Toxicology.
Mainassara Chekaraou, A. W., Rousset, A., Besseron, X., Varrette, S., & Peters, B. (2018). Hybrid MPI+OpenMP Implementation of eXtended Discrete Element Method. Proc. of the 9th Workshop on Applications for Multi-Core Architectures (WAMCA'18), part of 30th Intl. Symp. on Computer Architecture and High Performance Computing (SBAC-PAD 2018). Lyon, France: IEEE Computer Society.
May, P., Girard, S., Harrer, M., Bobbili, D. R., Schubert, J., Wolking, S., Becker, F., Lachance-Touchette, P., Meloche, C., Gravel, M., Niturad, C. E., Knaus, J., De Kovel, C., Toliat, M., Polvi, A., Iacomino, M., Guerrero-López, R., Baulac, S., Marini, C., Thiele, H., Altmüller, J., Jabbari, K., Ruppert, A.-K., Jurkowski, W., Lal, D., Rusconi, R., Cestèle, S., Terragni, B., Coombs, I. D., Reid, C. A., Striano, P., Caglayan, H., Siren, A., Everett, K., Møller, R. S., Hjalgrim, H., Muhle, H., Helbig, I., Kunz, W. S., Weber, Y. G., De Jonghe, P., Sisodiya, S. M., Nabbout, R., Franceschetti, S., Coppola, A., Vari, M. S., Kasteleijn-Nolst Trenité, D., Baykan, B., Ozbek, U., Bebek, N., Klein, K. M., Rosenow, F., Nguyen, D. K., Dubeau, F., Carmant, L., Lortie, A., Desbiens, R., Clément, J.-F., Cieuta-Walti, Sills, G. J., Auce, P., Francin, B., Johnson, M. R., Berghuis, B., Sander, J. W., Avbersek, A., McCormack, M., Cavalleri, G. L., Delanty, N., Depondt, C., Krenn, M., Zimprich, F., Peter, S., Nikanorova, M., Kraaij, R., van Rooij, J., Balling, R., Ikram, M. A., Uitterlinden, A. G., Avanzini, G., Schorge, S., Petrou, S., Mantegazza, M., Sander, T., LeGuern, E., Serratosa Jose M., Koeleman, B. P. C., Palotie, A., Lehesjoki, A.-E., Nothnagel, M., Nürnberg, P., Maljevic, S., Zara, F., Cossette, P., Krause, R., & Lerche, H. (2018). Rare coding variants in genes encoding GABAA receptors in genetic generalised epilepsies: an exome-based case-control study. Lancet Neurology, 17(8), 699-708.
Ibrahim, A. A. Z. A., Wasim, M. U., Varrette, S., & Bouvry, P. (2018). PRESENCE: Monitoring and Modelling the Performance Metrics of Mobile Cloud SaaS Web Services. Mobile Information Systems, 2018(1351386).
Pozzetti, G., Besseron, X., Rousset, A., & Peters, B. (2018, August). Parallel Coupling of CFD-DEM simulations. Paper presented at 6th MVAPICH User Group (MUG'18) Meeting, Columbus, OH, USA.
Malabirade, A., Habier, J., Heintz-Buschart, A., May, P., Godet, J., Halder, R., Etheridge, A., Galas, D., Wilmes, P., & Fritz, J. (2018). The RNA Complement of Outer Membrane Vesicles From Salmonella enterica Serovar Typhimurium Under Distinct Culture Conditions. Frontiers in Microbiology, 9, 2015.
Hartl, D.* , May, P.* , Gu, W.* , Mayhaus, M., Pichler, S., Spaniol, C., Glaab, E., Bobbili, D. R., Antony, P., Köglsberger, S., Kurz, A., Grimmer, T., Morgan, K., Vardarajan, B. N., Reitz, C., Hardy, J., Bras, J., Guerreiro, R., AESG, Balling, R., Schneider, J., & Riemenschneider, M. (2018, July 09). A rare loss-of function variant of ADAM17 is associated with late-onset familial Alzheimer disease. Molecular Psychiatry.
* These authors have contributed equally to this work.
Camino, R. D., Hammerschmidt, C., & State, R. (2018, July). Generating Multi-Categorical Samples with Generative Adversarial Networks. Paper presented at ICML 2018 workshop on Theoretical Foundations and Applications of Deep Generative Models, Stockholm, Sweden.
Ibrahim, A. A. Z. A., Wasim, U., Varrette, S., & Bouvry, P. (2018). PRESENCE: Performance Metrics Models for Cloud SaaS Web Services. Proc. of the 11th IEEE Intl. Conf. on Cloud Computing (CLOUD 2018). San Francisco, USA: IEEE Computer Society.
Abraha, K. E., Teferle, F. N., Hunegnaw, A., & Dach, R. (2018). Effect of unmodelled tidal displacements in GPS and GLONASS coordinate time series. Geophysical Journal International, 214(3), 2195-2206.
Bisdorff, R. (2018, June 13). UL HPC users'session: Mastering big data. Paper presented at UL HPC School 2018, Belval, Luxembourg.
Cartiaux, H., Varrette, S., Plugaru, V., Diehl, S., Parisot, C., & Bouvry, P. (2018, June). UL HPC Tutorial: HPC workflow with sequential jobs. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Diehl, S., Varrette, S., Plugaru, V., Parisot, C., Cartiaux, H., & Bouvry, P. (2018, June). UL HPC Tutorial: Building [custom] software with EasyBuild on the UL HPC platform. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Ginolhac, A., Emeras, J., Varrette, S., Plugaru, V., Diehl, S., Parisot, C., Cartiaux, H., & Bouvry, P. (2018, June). UL HPC Tutorial: Statistical Computing with R. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Ibrahim, A. A. Z. A. (2018). PRESEnCE: A Framework for Monitoring, Modelling and Evaluating the Performance of Cloud SaaS Web Services. 48th Annual IEEE/IFIP Intl. Conf. on Dependable Systems and Networks Workshops (DNS'18) (pp. 83-86). Luxembourg, Luxembourg: IEEE Computer Society.
Ibrahim, A. A. Z. A., Varrette, S., & Bouvry, P. (2018). On Verifying and Assuring the Cloud SLA by Evaluating the Performance of SaaS Web Services Across Multi-cloud Providers. 48th Annual IEEE/IFIP Intl. Conf. on Dependable Systems and Networks Workshops (DNS'18) (pp. 69-70). Luxembourg, Luxembourg: IEEE Computer Society.
Lopez Becerra, J. M., Ryan, P., Sala, P., & Skrobot, M. (2018, June). An Offline Dictionary Attack Against zkPAKE Protocol. Poster session presented at WiSec2018, Stockholm, Sweden.
Parisot, C., Cartiaux, H., Varrette, S., Plugaru, V., Diehl, S., & Bouvry, P. (2018, June). UL HPC Tutorial: Getting Started on the Uni.lu HPC platform. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Parisot, C., Diehl, S., Varrette, S., Plugaru, V., Cartiaux, H., & Bouvry, P. (2018, June). UL HPC Tutorial: (Advanced) Prototyping with Python. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Plugaru, V., Besseron, X., Varrette, S., Diehl, S., Parisot, C., Cartiaux, H., & Bouvry, P. (2018, June). UL HPC Tutorial: Performance engineering - HPC debugging and profilling. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Plugaru, V., Diehl, S., Varrette, S., Parisot, C., Cartiaux, H., & Bouvry, P. (2018, June). UL HPC Tutorial: Bio-informatics workflows and applications. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Plugaru, V., Varrette, S., Diehl, S., Parisot, C., Cartiaux, H., & Bouvry, P. (2018, June). UL HPC Tutorial: Advanced Job scheduling with SLURM and OAR. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Plugaru, V., Varrette, S., Diehl, S., Parisot, C., Cartiaux, H., & Bouvry, P. (2018, June). UL HPC Tutorial: Basic and Advanced scientific computing using MATLAB. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Plugaru, V., Varrette, S., Diehl, S., Parisot, C., Cartiaux, H., & Bouvry, P. (2018, June). UL HPC Tutorial: HPC Containers with Singularity. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Plugaru, V., Varrette, S., Diehl, S., Parisot, C., Cartiaux, H., & Bouvry, P. (2018, June). UL HPC Tutorial: Multi-Physics workflows: test cases on CFD / MD / Chemistry applications. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Torun, E., Miranda, H. P. C., Molina-Sánchez, A., & Wirtz, L. (2018). Interlayer and intralayer excitons in MoS2/WS2 and MoSe2/WSe2 heterobilayers. Physical Review. B, Condensed Matter, 97, 245427.
Varrette, S., Bouvry, P., Plugaru, V., Diehl, S., Parisot, C., & Cartiaux, H. (2018, June). Overview and Challenges of the UL HPC Facility at the EuroHPC Horizon. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg, Luxembourg.
Varrette, S., Plugaru, V., Diehl, S., Parisot, C., Cartiaux, H., & Bouvry, P. (2018, June). UL HPC Tutorial: Parallel computations with OpenMP/MPI. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Varrette, S., Plugaru, V., Diehl, S., Parisot, C., Cartiaux, H., & Bouvry, P. (2018, June). UL HPC Tutorial: Big Data Applications (batch, stream, hybrid) with Hadoop and Spark. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Varrette, S., Plugaru, V., Diehl, S., Parisot, C., Cartiaux, H., & Bouvry, P. (2018, June). UL HPC Tutorial: Machine and Deep Learning on the UL HPC Platform. Paper presented at 7th High Performance Computing School, University of Luxembourg, Luxembourg.
Heintz-Buschart, A., Yusuf, D., Kaysen, A., Etheridge, A., Fritz, J., May, P., de Beaufort, C., Upadhyaya, B. B., Ghosal, A., Galas, D. J., & Wilmes, P. (2018). Small RNA profiling of low biomass samples: identification and removal of contaminants. BMC Biology, 16(52).
Abraha, K. E. (2018). MULTI-GNSS ERROR CHARACTERISTICS AND BENEFITS TO LONG-TERM MONITORING APPLICATIONS IN GEOSCIENCES. Unpublished doctoral thesis, University of Luxembourg, ​​Luxembourg.
Dentler, J. E., Rosalie, M., Danoy, G., Bouvry, P., Kannan, S., Olivares Mendez, M. A., & Voos, H. (2018, April 20). Collision Avoidance Effects on the Mobility of a UAV Swarm Using Chaotic Ant Colony with Model Predictive Control. Journal of Intelligent \& Robotic Systems, 1-17.
Teferle, F. N., Hunegnaw, A., Abraha, K. E., Woodworth, P., Williams, S., Hibbert, A., Smalley, R., Dalziel, I., & Lawver, L. (2018, April 09). Vertical Land Movements and Sea Level Changes around South Georgia Island. Poster session presented at European Geosciences Union General Assembly 2018, Vienna, Austria.
May, P.* , Pichler, S.* , Hartl, D., Bobbili, D. R., Mayhaus, M., Spaniol, C., Kurz, A., Balling, R., Schneider, J., & Riemenschneider, M. (2018). Rare ABCA7 variants in 2 German families with Alzheimer disease. Neurology Genetics, 4(2).
* These authors have contributed equally to this work.
Bouvry, P., Varrette, S., Plugaru, V., Peter, S., Cartiaux, H., & Parisot, C. (2018, April). Large-scale research data management: Road to GDPR compliance. Paper presented at Luxembourg Data Conversations, Luxembourg, Luxembourg.
Jung, P., Zhang, Z., Paczia, N., Jäger, C., Ignac, T., May, P., & Linster, C. (2018). Natural variation of chronological aging in the Saccharomyces cerevisiae species reveals diet-dependent mechanisms of life span control. npj Aging and Mechanisms of Disease, 4(3).
Klos, A., Hunegnaw, A., Teferle, F. N., Abraha, K. E., Ahmed, F., & Bogusz, J. (2018, March 02). Statistical significance of trends in Zenith Wet Delay from re-processed GPS solutions. GPS Solutions.
Nyffeler, J., Chovancova, P., Dolde, X., Holzer, A.-K., Purvanov, V., Kindinger, I., Kerins, A., Higton, D., Silvester, S., van Vugt-Lussenburg, B. M. A., Glaab, E., van der Burg, B., Maclennan, R., Legler, D. F., & Leist, M. (2018). A structure-activity relationship linking non-planar PCBs to functional deficits of neural crest cells: new roles for connexins. Archives of Toxicology, 92(3), 1225–1247.
Varrette, S. (2018, March). Next Generation Computing and Storage at Scale: Overview and Implementation within the European HPC strategy. Paper presented at Workshop: “Accelerating Modelling and Simulation in the Data Deluge Era”, Fontainebleau, France.
Habier, J., May, P., Heintz-Buschart, A., Ghosal, A., Wienecke-Baldacchino, A., Nolte-'t Hoen, E. N. M., Wilmes, P., & Fritz, J. (2018). Extraction and Analysis of RNA Isolated from Pure Bacteria-Derived Outer Membrane Vesicles. In V., Arluison & C. V., Valverde, Bacterial Regulatory RNA (Methods in Molecular Biology, pp. 213-230). New York, USA: Humana Press.
Kieffer, E., Rosalie, M., Danoy, G., & Bouvry, P. (2018, February 26). Bayesian optimization to enhance coverage performance of a swarm of UAV with chaotic dynamics. Paper presented at International Workshop on Optimization and Learning: Challenges and Applications (OLA 2018), Alicante, Spain.
Fitzgerald, J. C., Zimprich, A., Bobbili, D. R., Sharma, M., May, P., & Krüger, R. (2018, January 24). Reply: No evidence for rare TRAP1 mutations influencing the risk of idiopathic Parkinson’s disease. Brain : A Journal of Neurology.
Bobbili, D. R.* , Lal, D.* , May, P.* , Reinthaler, E. M., Jabbari, K., Thiele, H., Nothnagel, M., Jurkowski, W., EuroEPINOMICS COGIE Consortium, Balling, R., Feucht, M., Nürnberg, P., Lerche, H., Zimprich, F., Krause, R., & Neubauer, B. A. (2018, January 22). Exome-wide analysis of mutational burden in patients with typical and atypical Rolandic Epilepsy. European Journal of Human Genetics.
* These authors have contributed equally to this work.
Heyne, H. O., EuroEPINOMICS RES Consortium, Abou Jamra, R., Caglayan, H., Craiu, D., De Jonghe, P., Guerrini, R., Helbig, K. L., Koeleman, B. P. C., Kosmicki, J. A., Linnankivi, T., May, P., Muhle, H., Moeller, R. S., Neubauer, B., Palotie, A., Pendziwiat, M., Stamberger, H., Striano, P., Tang, S., Wu, S., Daly, M. J., Poduri, A., Weber, Y., Weckhuysen, S., Sisodiya, S. M., Helbig, I., Lal, D., & Lemke, J. R. (2018). De novo Variants in Neurodevelopmental Disorders with Epilepsy. Eprint/Working paper retrieved from http://biorxiv.org/content/early/2017/04/03/123323.
Bernard, N., & Leprévost, F. (2018). Evolutionary Algorithms for Convolutional Neural Network Visualisation. In E., Meneses, H., Castro, C. J., Barrios Hernández, & R., Ramos-Pollan (Eds.), High Performance Computing -- 5th Latin American Conference, CARLA 2018, Piedecuesta, Colombia. Springer.
Hoja, J., & Tkatchenko, A. (2018). First-principles stability ranking of molecular crystal polymorphs with the DFT+MBD approach. Faraday Discussions, 211, 253-274.
Kirchmeyer, M., Servais, F., Hamdorf, M., Nazarov, P. V., Ginolhac, A., Halder, R., Vallar, L., Glanemann, M., Rubie, C., Lammert, F., Kreis, S., & Behrmann, I. (2018). Cytokine-mediated modulation of the hepatic miRNome: miR-146b-5p is an IL-6-inducible miRNA with multiple targets. Journal of leukocyte biology.
Rosalie, M., Danoy, G., Chaumette, S., & Bouvry, P. (2018). Chaos-enhanced mobility models for multilevel swarms of UAVs. Swarm and Evolutionary Computation.
Teferle, F. N., Hunegnaw, A., Abraha, K. E., Woodworth, P., Williams, S., Hibbert, A., Smalley, R., Dalziel, I., & Lawver, L. (2017, December 11). First Vertical Land Movement Estimates on South Georgia Island: An Impact Study on Sea Level Change from Tide Gauge and Altimetry Measurements. Poster session presented at American Geophysical Union Fall Meeting 2017, New Orleans, 10-15 December 2017, USA.
Letellier, E., Schmitz, M., Ginolhac, A., Rodriguez, F., Ullmann, P., Qureshi-Baig, K., Frasquilho, S., Antunes, L., & Haan, S. (2017). Loss of Myosin Vb in colorectal cancer is a strong prognostic factor for disease recurrence. British Journal of Cancer, 117(11), 1689-1701.
Ellens, K. W., Christian, N., Satagopam, V., May, P., & Linster, C. (2017). Confronting the catalytic dark matter encoded by sequenced genomes. Nucleic Acids Research, 45(20), 11495-11514.
Reynolds, N., Adamcik, J., Berryman, J., Handschin, S., Hakami Zanjani, A. A., Li, W., Liu, K., Zhang, A., & Mezzenga, R. (2017). Competition between crystal and fibril formation in molecular mutations of amyloidogenic peptides. Nature Communications, 8.
Taghavi, A., van der Schoot, P., & Berryman, J. (2017). DNA partitions into triplets under tension in the presence of organic cations, with sequence evolutionary age predicting the stability of the triplet phase. Quarterly Reviews of Biophysics, 50.
Varrette, S., Bouvry, P., Plugaru, V., Diehl, S., Parisot, C., & Cartiaux, H. (2017, November). Overview and Challenges of the UL HPC Facility at the EuroHPC Horizon. Paper presented at 6th High Performance Computing School, University of Luxembourg, Luxembourg, Luxembourg.
Teferle, F. N. (2017). Global Navigation Satellite System (GNSS) at Tide Gauge Installations in the South Atlantic Ocean.
Teferle, F. N. (2017). Sea Level Changes, Monitoring of Vertical Land Movements and TIGA Activities.
Pozzetti, G., Besseron, X., Rousset, A., Mainassara Chekaraou, A. W., & Peters, B. (2017). On the performance of an overlapping-domain parallelization strategy for Eulerian-Lagrangian Multiphysics software. AIP Conference Proceedings ICNAAM 2017. New York, NY: American Institute of Physics.
Rosalie, M., Brust, M. R., Danoy, G., Chaumette, S., & Bouvry, P. (2017). Coverage optimization with connectivity preservation for UAV swarms applying chaotic dynamics. IEEE International Conference on Autonomic Computing (ICAC), Columbus 17-21 July 2017 (pp. 113-118).
Rosalie, M., Dentler, J. E., Danoy, G., Bouvry, P., Kannan, S., Olivares Mendez, M. A., & Voos, H. (2017). Area exploration with a swarm of UAVs combining deterministic Chaotic Ant Colony Mobility with position MPC. 2017 International Conference on Unmanned Aircraft Systems (ICUAS) (pp. 1392-1397).
Hunegnaw, A., Teferle, F. N., Abraha, K. E., Bingley, R., Hansen, D., Deng, Z., Schöne, T., Santamaria-Gomez, A., Gravelle, M., Wöppelmann, G., Sanchez, L., Moore, M., & Jia, M. (2017, July 13). A Global Vertical Land Movement Data Set from a Combination of Global Navigation Satellite System Solutions. Poster session presented at International WCRP/IOC Conference 2017 Regional Sea Level Changes and Coastal Impacts, New York, USA.
Hunegnaw, A., Teferle, F. N., Abraha, K. E., Santamaria-Gomez, A., Gravelle, M., Wöppelmann, G., Schöne, T., Deng, Z., Bingley, R., Hansen, D., Sanchez, L., & Moore, M. (2017, July 03). On the Scientific Applications of IGS Products: An Assessment of the Reprocessed TIGA Solutions and Combined Products. Paper presented at IGS Workshop 2017, Pathways to Improved Precision, Paris, France.
Wangsom, P., Lavangnananda, K., & Bouvry, P. (2017). Measuring data locality ratio in virtual MapReduce cluster using WorkflowSim. Proceedings of the 14th International Joint Conference on Computer Science and Software Engineering (JCSSE), 2017 14th. IEEE.
Varrette, S., Bouvry, P., Plugaru, V., Diehl, S., Parisot, C., & Cartiaux, H. (2017, June). Overview and Challenges of the UL HPC Facility at the Belval and EuroHPC Horizon. Paper presented at 5th High Performance Computing School, University of Luxembourg, Luxembourg, Luxembourg.
Blauwendraat, C., Faghri, F., Pihlstrom, L., Geiger, J. T., Elbaz, A., Lesage, S., May, P., Aude, N., Abramzon, Y., Murphy, N. A., Gibbs, J. R., Ryten, M., Ferrari, R., Bras, J., Guerreiro, R., Williams, J., Sims, R., Lubbe, S., Hernandez, D. G., Mok, K. Y., Robak, L., Camphell, R. H., Rogaeva, E., Traynor, B. J., Chia, R., Chung, S. J., International Parkinson’s Disease Genomics Consortium (IPDGC), COURAGE-PD Consortium, Glaab, E., Balling, R., Hardy, J. A., Brice, A., Houlden, H., Shulman, J. M., Morris, H. R., Gasser, T., Heutink, P., Krüger, R., Sharma, M., Simon-Sanchez, J., Nalls, M. A., Singleton, A. B., & Scholz, S. W. (2017, May 17). NeuroChip, an updated version of the NeuroX genotyping platform to rapidly screen for variants associated with neurological diseases. Neurobiology of Aging.
Ahmed, F., Hunegnaw, A., Teferle, F. N., & Bingley, R. (2017, April 27). Evaluation of ERA-Interim for tropospheric delay and water vapour estimation in different climate zones using ground-based GNSS observations. Poster session presented at European Geoscience Union General Assembly 2017, Vienne, Austria.
Hunegnaw, A., Teferle, F. N., & Abraha, K. E. (2017, April 23). A New Global Vertical Land Movement Data Set from the TIGA Combined. Poster session presented at European Geosciences Union General Assembly, Vienna, Austria.
Santiago-Sim, T., Burrage, L. C., Ebstein, F., Tokita, M. J., Miller, M., Bi, W., Braxton, A. A., Rosenfeld, J. A., Shahrour, M., Lehmann, A., Cogne, B., Küry, S., Besnard, T., Isidor, B., Bézieau, S., Hazert, I., Nagakura, H., Immken, L. L., Littlejohn, R. O., Roeder, E., Euroepinomics Res Consortium ARE working group, Balling, R., Caglayan, H., Kara, B., Hardies, K., Weckhuysen, S., May, P., Lemke, J. R., Elpeleg, O., Abu-Libdeh, B., James, K. N., Slihavy, J. L., Issa, M. Y., Zaki, M. S., Gleeson, J. G., Seavitt, J. R., Dickinson, M. E., Ljungberg, M. C., Wells, S., Johnson, S. L., Teboul, L., Eng, C. M., Yang, Y., Kloetzel, P.-M., Heaney, J. D., & Walkiewicz, M. A. (2017). Biallelic Variants in OTUD6B Cause an Intellectual Disability Syndrome Associated with Seizures and Dysmorphic Features. American Journal of Human Genetics, 100(4), 676-688.
Marini, C., Hardies, K., Pisano, T., May, P., Weckhuysen, S., Cellini, E., Suls, A., Mei, D., Balling, R., De Jonghe, P., Helbig, I., Garozzo, D., EuroEPINOMICS consortium AR working group, & Guerrini, R. (2017). Recessive mutations in SLC35A3 cause early onset epileptic encephalopathy with skeletal defects. American Journal of Medical Genetics. Part A, 173(4), 1119-1123.
Rosalie, M., Danoy, G., Chaumette, S., & Bouvry, P. (2017). Impact du mécanisme chaotique sur l’optimisation d’un modèle de mobilité pour un essaim de drones devant réaliser une couverture de zone. In E., Falcon, M., Lefranc, F., Pétrélis, & C.-T., Pham (Eds.), Comptes-rendus de la 20e Rencontre du Non Linéaire (pp. 79-84). Saint Etienne du Rouvray, France: Non-Linéaire Publications.
Klos, A., Hunegnaw, A., Teferle, F. N., Abraha, K. E., Ahmed, F., & Bogusz, J. (2017, February 22). Noise characteristics in Zenith Total Delay from homogeneously reprocessed GPS time series. Paper presented at COST Action ES1206 GNSS4SWEC Final Workshop, Noordwijk, The Netherlands.
Klopotek, M., Hansen-Goos, H., Dixit, M., Schilling, T., Schreiber, F., & Oettel, M. (2017). Monolayers of hard rods on planar substrates. II. Growth. Journal of Chemical Physics, 146, 084903.
Besseron, X. (2017, January). XDEM: from HPC to the Cloud. Paper presented at BusinessClouds 2017.
Hartl, D., May, P., Gu, W., Mayhaus, M., Glaab, E., Antony, P., Bobbili, D. R., Köglsberger, S., Pichler, S., Spaniol, C., Kurz, A., Balling, R., Schneider, J., & Riemenschneider, M. (2017). IDENTIFICATION OF A RARE GENE VARIANT THAT IS ASSOCIATED WITH FAMILIAL ALZHEIMER DISEASE AND REGULATES APP EXPRESSION. Alzheimer's & Dementia : The Journal of the Alzheimer's Association, 13(7, Supplement), 648.
Heintz, A., Pandey, U., Wicke, T., Sixel-Doring, F., Janzen, A., Sittig-Wiegand, E., Trenkwalder, C., Oertel, W. H., Mollenhauer, B., & Wilmes, P. (2017). The nasal and gut microbiome in Parkinson's disease and idiopathic rapid eye movement sleep behavior disorder. Movement disorders : official journal of the Movement Disorder Society.
Abraha, K. E., Teferle, F. N., Hunegnaw, A., & Dach, R. (2016, December 12). On the Impact of Multi-GNSS Solutions on Satellite Products and Positioning. Poster session presented at American Geophysical Union (AGU) Fall Meeting 2016, San Francisco, United States of America.
Hunegnaw, A., Teferle, F. N., Abraha, K. E., Bingley, R., & Hansen, D. (2016, December 12). Error analysis of Tide Gauge Benchmark Monitoring (TIGA) Analysis Center stacked solutions. Poster session presented at AGU Fall Meeting 2016, San Francisco, CA, USA, 12-16 December, San Francisco, USA.
Abraha, K. E., Teferle, F. N., Hunegnaw, A., & Dach, R. (2016, December 09). GNSS related periodic signals in coordinate time-series from Precise Point Positioning. Geophysical Journal International.
Jimenez, M., Papadakis, M., & Le Traon, Y. (2016). An Empirical Analysis of Vulnerabilities in OpenSSL and the Linux Kernel. 2016 Asia-Pacific Software Engineering Conference (APSEC).
Kuhnhold, A., & Schilling, T. (2016). Isotropic-nematic transition and cholesteric phases of helical Yukawa rods. Journal of Chemical Physics, 145(194904).
Bisdorff, R. (2016, November). Computing linear rankings from trillions of pairwise outranking situations. Paper presented at DA2PL'2016 From Multiple Criteria Decision Aid to Preference Learning, Paderborn, Germany.
Rosalie, M., Danoy, G., Chaumette, S., & Bouvry, P. (2016). From Random Process to Chaotic Behavior in Swarms of UAVs. DIVANet '16 Proceedings of the 6th ACM Symposium on Development and Analysis of Intelligent Vehicular Networks and Applications (pp. 9-15). New York, USA: ACM.
Varrette, S., Bouvry, P., Plugaru, V., Diehl, S., & Cartiaux, H. (2016, November). Overview and Challenges of the UL HPC Facility at the Belval Horizon. Paper presented at 4th High Performance Computing School, University of Luxembourg, Luxembourg, Luxembourg.
Jimenez, M., Papadakis, M., & Le Traon, Y. (2016). Vulnerability Prediction Models: A case study on the Linux Kernel. 16th IEEE International Working Conference on Source Code Analysis and Manipulation, SCAM 2016, Raleigh, US, October 2-3, 2016.
Bruckner, J., Kuhnhold, A., Honorato Rios, C., Schilling, T., & Lagerwall, J. (2016, August 29). Enhancing Self-Assembly in Cellulose Nanocrystal Suspensions Using High-Permittivity Solvents. Langmuir.
Oettel, M., Klopotek, M., Dixit, M., Empting, E., Schilling, T., & Hansen-Goos, H. (2016). Monolayers of hard rods on planar substrates: I. Equilibrium. Journal of Chemical Physics, 145, 074902.
Hunegnaw, A., Klos, A., Hansen, D., Teferle, F. N., Abraha, K. E., Bingley, R., & Bogusz, J. (2016, July 30). A New Vertical Land Movements Data Set from a Reprocessing of GNSS at Tide Gauge Stations. Paper presented at IAG/CPGPS International Conference on GNSS+ (ICG+ 2016) Advances, Opportunities and Challenges, Shanghai, China.
Teferle, F. N., Ding, W., Abraha, K. E., Hunegnaw, A., Laurichesse, D., Dach, R., Kazmierski, K., & Yunbin, Y. (2016, July 30). Multi-GNSS Benefits to Real-Time and Long-Term Monitoring Applications. Paper presented at IAG/CPGPS International Conference on GNSS+ (ICG+ 2016) Advances, Opportunities and Challenges, Shanghai, China.
Klos, A., Teferle, F. N., Hunegnaw, A., Ahmed, F., Abraha, K. E., & Bogusz, J. (2016, July 29). On the Properties of Zenith Total Delay Time Series from Reprocessed GPS Solutions. Poster session presented at IAG/CPGPS International Conference on GNSS+ (ICG+ 2016) - Advances, Opportunities and Challenges, Shanghai, China.
Abraha, K. E., Teferle, F. N., Hunegnaw, A., & Dach, R. (2016, July 21). Impact of Limited Satellite Visibility on Estimates of Vertical Land Movements. International Association of Geodesy Symposia, 1-8.
Hardies, K., Cai, Y., Jardel, C., Jansen, A. C., Cao, M., May, P., Djémié, T., Hachon Le Camus, C., Keymolen, K., Deconinck, T., Bhambhani, V., Long, C., Sajan, S. A., Helbig, K. L., Suls, A., Balling, R., Helbig, I., De Jonghe, P., Depienne, C., De Camilli, P., & Weckhuysen, S. (2016, July 19). Loss of SYNJ1 dual phosphatase activity leads to early onset refractory seizures and progressive neurological decline. Brain : A Journal of Neurology.
Emeras, J., Varrette, S., & Bouvry, P. (2016). Amazon Elastic Compute Cloud (EC2) vs. in-House HPC Platform: a Cost Analysis. Proc. of the 9th IEEE Intl. Conf. on Cloud Computing (CLOUD 2016). San Francisco, USA: IEEE Computer Society.
Hunegnaw, A., Teferle, F. N., Bingley, R., & Hansen, D. (2016). Status of TIGA activities at the British Isles continuous GNSS Facility and the University of Luxembourg. International Association of Geodesy Symposia, 143, 617-623.
Tchernykh, A., Lozano, L., Schwiegelshohn, U., Bouvry, P., Pecero, J., Nesmachnow, S., & Drosdov, A. (2016). Online Bi-Objective Scheduling for IaaS Clouds Ensuring Quality of Service. Journal of Grid Computing, 14.
Appelt, D., Nguyen, D. C., & Briand, L. (2016). Automated Testing of Web Application Firewalls (TR-SnT-2016-1).
Muszynski, J., Varrette, S., & Bouvry, P. (2016). Reducing Efficiency of Connectivity-Splitting Attack on Newscast via Limited Gossip. Proc. of the 19th European Event on Bio-Inspired Computation, EvoCOMNET 2016. Porto, Portugal: Springer Verlag.
Nielsen, S. S. (2016). Diversity Preserving Genetic Algorithms - Application to the Inverted Folding Problem and Analogous Formulated Benchmarks. Unpublished doctoral thesis, University of Luxembourg, ​​Luxembourg.
Hunegnaw, A., & Teferle, F. N. (2016, February). Quality assessment of Mulit-Year BLT Tide Gauge Benchmark Monitoring (TIGA) repro2 Solution. Poster session presented at IGS2016 Workshop, Sydney, Australia.
Panchenko, A., Lanze, F., Zinnen, A., Henze, M., Pennekamp, J., Wehrle, K., & Engel, T. (2016). Website Fingerprinting at Internet Scale. Proceedings of the 23rd Internet Society (ISOC) Network and Distributed System Security Symposium (NDSS 2016).
Dixit, M., Meyer, H., & Schilling, T. (2016, January 11). Connectivity percolation in suspensions of attractive square-well spherocylinders. Physical Review. E : Statistical, Nonlinear, and Soft Matter Physics, (93), 012116.
Tretakiova, A., Seredynski, F., & Bouvry, P. (2016). Online Bi-Objective Scheduling for IaaS Clouds Ensuring Quality of Service. Simulation, 92.
Bisdorff, R. (2016, January). Ranking big performance tableaux with multiple incommensurable criteria and missing data. Paper presented at ORBEL 30 30th Belgian Conference on Operations Research, Louvain-la-Neuve, Belgium.
Berryman, J., Anwar, M., Dorosz, S., & Schilling, T. (2016). The early crystal nucleation process in hard spheres shows synchronised ordering and densification. Journal of Chemical Physics, 145, 211901.
Casadei, N., Sood, P., Ulrich, T., Kieper, N., Helling, S., May, C., Glaab, E., Chen, J., Nuber, S., Marcus, K., Rapaport, D., Ott, T., Riess, O., Krüger, R., & Fitzgerald, J. (2016). Mitochondrial Defects and Neurodegeneration in Mice Overexpressing Wild Type or G399S Mutant HtrA2. Human Molecular Genetics, 25(3), 459-71.
Ceccato, M., Nguyen, D. C., Appelt, D., & Briand, L. (2016). SOFIA: An Automated Security Oracle for Black-Box Testing of SQL-Injection Vulnerabilities. Proceedings of the 31th IEEE/ACM International Conference on Automated Software Engineering.
Emeras, J., Besseron, X., Varrette, S., Bouvry, P., & Peters, B. (2016). HPC or the Cloud: a cost study over an XDEM Simulation. Proc. of the 7th International Supercomputing Conference in Mexico (ISUM 2016). Puebla, México.
Heintz, A., May, P., Laczny, C. C., Lebrun, L., Bellora, C., Krishna, A., Wampach, L., Schneider, J., Hogan, A., Beaufort, C. D., & Wilmes, P. (2016). Erratum: Integrated multi-omics of the human gut microbiome in a case study of familial type 1 diabetes. Nature microbiology, 2, 16227.
Kleiderman, S., Gutbier, S., Tufekci, K. U., Ortega, F., Sá, J. V., Teixeira, A. P., Brito, C., Glaab, E., Berninger, B., Alves, P. M., & Leist, M. (2016). Conversion of non-proliferating astrocytes into neurogenic neural stem cells: control by FGF2 and IFN-gamma. Stem Cells, 34(12), 2861–2874.
Kleiderman, S., Sá, J., Teixeira, A., Brito, C., Gutbier, S., Evje, L., Hadera, M., Glaab, E., Henry, M., Agapios, S., Alves, P., Sonnewald, U., & Leist, M. (2016). Functional and phenotypic differences of pure populations of stem cell-derived astrocytes and neuronal precursor cells. Glia, 64(5), 695-715.
Molina-Sanchez, A., Palummo, M., Marini, A., & Wirtz, L. (2016). Temperature-dependent excitonic effects in the optical properties of single-layer MoS2. Physical Review. B : Condensed Matter, 93, 155435.
Reinsbach, S., Wienecke, A., Ginolhac, A., Vallar, L., Krishna, Krishna, A., Nazarov, P., May, P., & Kreis, S. (2016). “Melanomics”: analysis and integration of whole genomes, transcriptomes and miRNomes of primary melanoma patients. European Journal of Cancer, 61(Suppl.1), 32.
Sidorov, D., & Teferle, F. N. (2016). Impact of Antenna Phase Centre Calibrations on Position Time Series: Preliminary Results. In P., Willis & C., Rizos (Eds.), IAG 150 Years Proceedings of the 2013 IAG Scientific Assembly, Postdam,Germany, 1–6 September, 2013 (pp. 117-123). Heidelberg, Germany: Springer.
Teferle, F. N., Hunegnaw, A., Ahmed, F., Sidorov, D., Woodworth, P. L., Foden, P. R., & Williams, S. P. D. (2016). The King Edward Point Geodetic Observatory, South Georgia, South Atlantic Ocean: A First Evaluation and Potential Contributions to Geosciences. In P., Willis & C., Rizos (Eds.), IAG 150 Years Proceedings of the 2013 IAG Scientific Assembly, Postdam, Germany, 1–6 September, 2013 (pp. 625-630). Heidelberg, Germany: Springer.
Zotkiewicz, M., Guzek, M., Kliazovich, D., & Bouvry, P. (2016). Minimum Dependencies Energy-Efficient Scheduling in Data Centers. IEEE Transactions on Parallel & Distributed Systems.
Ameziane, N., May, P., Van de Vrugt, H. J., Van Rossum-Fikkert, S. E., Ristic, D., Williams, G. J., Balk, J., Rockx, D., Li, H., Rooimans, M. A., Oostra, A. B., Velleuer, E., Dietrich, R., Bleijerveld, O. B., Altelaar, A. F. M., Meijers-Heijboer, H., Joenje, H., Glusman, G., Roach, J. C., Hood, L., Galas, D. J., Balling, R., den Dunnen, J., De Winter, J. P., Kanaar, R., Gelinas, R., & Dorsman, J. C. (2015). A novel Fanconi anemia subtype associated with a dominant-negative mutation in RAD51. Nature Communications, 6(8829).
Hunegnaw, A., & Teferle, F. N. (2015, December 17). Assessment of BLT Tide Gauge Benchmark Monitoring (TIGA) repro2 Solutions. Poster session presented at AGU Fall Meeting 2015, San Francisco, CA, USA, 14-18 December, San Francisco, USA.
Molina-Sanchez, A., Hummer, K., & Wirtz, L. (2015). Vibrational and optical properties of MoS2: From monolayer to bulk. Surface Science Reports, 70(4), 554-586.
Killcoyne, S. (2015). Insilico genomes for high-throughput sequencing cancer-specific analysis. Unpublished doctoral thesis, University of Luxembourg, ​Belval, ​​Luxembourg.
Hamadi, M., Heinen, A., Jonard, N., & Valdesogo, A. (2015). Desperately Seeking Small Worlds in Corporate Boards: International Evidence from Listed Firms. Eprint/Working paper retrieved from http://wwwen.uni.lu/research/fdef/crea/publications2/discussion_papers.
Abraha, K. E., Teferle, F. N., Hunegnaw, A., & Dach, R. (2015, October 27). Signal Obstructions at GNSS Stations: Benefits From Multi-GNSS Observations. Poster session presented at 5th International Colloquium on Scientific and Fundamental Aspects of the Galileo Programme, Braunschweig, Germany.
Kirsch, C. (2015). Multilingual oracies. Ein Bericht einer Weiterbildung zur Förderung der Mündlichkeit anhand von Versen und Bilderbüchern. Dudelange, Luxembourg: Ministère de l'Education nationale, de l'Enfance et de la Jeunesse.
Ding, W., Ahmed, F., Teferle, F. N., Laurichesse, D., & Abraha, K. E. (2015, October). An evaluation of multi-GNSS zenith tropospheric delay products based on real-time satellite products. Poster session presented at 5th Galileo Science Colloquium.
Nesmachnow, S., Dorronsoro, B., Talbi, E.-G., & Bouvry, P. (2015). Metaheuristics for the Virtual Machine Mapping Problem in Clouds. Informatica, Lith. Acad. Sci, 26(1), 111-134.
Varrette, S., Dorronsorro, B., & Bouvry, P. (2015). An LLVM-based Approach to Generate Energy Aware Code by means of MOEAs. Proc. of the 7th European Symposium on Computational Intelligence and Mathematics.(ESCIM 2015). Cádiz, Spain.
Hardies, K., de Kovel, C. G. F., Weckhuysen, S., Asselbergh, B., Geuens, T., Deconnick, T., Azmi, A., May, P., Brilstra, E., Becker, F., Barisic, N., Craiu, D., Braun, K., Lal, D., Thiele, H., Schubert, J., Weber, Y., van't Slot, R., Autosomal recessive working group of the EuroEPINOMICS RES Consortium, Nürnberg, P., Balling, R., Timmermann, V., Lerche, H., Maudsley, S., Helbig, I., Suls, A., Koeleman, B. P. C., & De Jonghe, P. (2015, September 18). Recessive mutations in SLC13A5 result in a loss of citrate transport and cause neonatal epilepsy, developmental delay and teeth hypoplasia. Brain : A Journal of Neurology.
Galhardo, M. S., Berninger, P., Nguyen, T.-P., Sauter, T., & Sinkkonen, L. (2015). Cell type-selective disease-association of genes under high regulatory load. Nucleic Acids Research, 43(18), 8839-8855.
Froehlicher, G., Lorchat, E., Fernique, F., Chaitanya, J., Molina-Sanchez, A., Wirtz, L., & Berciaud, S. (2015). Unified Description of the Optical Phonon Modes in N-Layer MoTe2. Nano Letters, 15, 6481–6489.
Pereira Coutada Miranda, H., Molina-Sanchez, A., & Wirtz, L. (2015, September). Electronic and Vibrational proprieties of graphene on Ir(111) and SiC(100). Poster session presented at PSI-K - 2015 Conference.
Killcoyne, S., & del Sol Mesa, A. (2015, August 11). Identification of large-scale genomic variation in cancer genomes using in silico reference models. Nucleic Acids Research.
Li, J., Pereira Coutada Miranda, H., Niquet, Y.-M., Genovese, L., Duchemin, I., Wirtz, L., & Delerue, C. (2015, August). Phonon-limited carrier mobility and resistivity from carbon nanotubes to graphene. Physical Review. B: Condensed Matter and Materials Physics.
Cui, X., & Schiltz, J. (2015, July 09). Asset Pricing Models with Underlying Time-varying Lévy Processes. Paper presented at Stochastics & Computational Finance 2015, Lisboa, Portugal.
Abraha, K. E., Teferle, F. N., Hunegnaw, A., & Dach, R. (2015, June 27). Impact of Limited Multi-GNSS Visibility on Vertical Land Movement Estimates. Poster session presented at 26th General Assembly of the International Union of Geodesy and Geophysics (IUGG), Prague, Czech Republic.
Varrette, S., Bouvry, P., Plugaru, V., Diehl, S., & Cartiaux, H. (2015, June). High Performance Computing (HPC) at UL: Overview (as of 2015) and Usage. Paper presented at 3rd High Performance Computing School, University of Luxembourg, Luxembourg, Luxembourg.
Emeras, J., Varrette, S., Guzek, M., & Bouvry, P. (2015). Evalix: Classification and Prediction of Job Resource Consumption on HPC Platforms. Proc. of the 19th Intl. Workshop on Job Scheduling Strategies for Parallel Processing (JSSPP'15), part of the 29th IEEE/ACM Intl. Parallel and Distributed Processing Symposium (IPDPS 2015). IEEE Computer Society.
Muszynski, J., Varrette, S., Dorronsorro, B., & Bouvry, P. (2015). Distributed Cellular Evolutionary Algorithms in a Byzantine Environment. Proc. of the 18th Intl. Workshop on Nature Inspired Distributed Computing (NIDISC 2015), part of the 29th IEEE/ACM Intl. Parallel and Distributed Processing Symposium (IPDPS 2015). Hyderabad, India: IEEE Computer Society.
Hunegnaw, A., & Teferle, F. N. (2015, April 12). A Multi-Year Combination of Tide Gauge Benchmark Monitoring (TIGA) Analysis Center Products. Poster session presented at EGU General Assembly 2015, Vienna, Austria, 12-17 April 2015, Vienna, Austria.
Ruiz, P., Dorronsoro, B., Talbi, E.-G., & Bouvry, P. (2015). Finding a robust configuration for the AEDB information dissemination protocol for mobile ad hoc networks. Applied Soft Computing, 32, 494-508.
Molina-Sanchez, A., Palummo, M., Marini, A., & Wirtz, L. (2015, March 05). Ab-initio study of the temperature effects on the optical properties of transition metal dichalcogenides. Paper presented at APS March Meeting.
Besseron, X., Plugaru, V., Mahmoudi, A. H., Varrette, S., Peters, B., & Bouvry, P. (2015). Performance Evaluation of the XDEM framework on the OpenStack Cloud Computing Middleware. Proceedings of the Fourth International Conference on Parallel, Distributed, Grid and Cloud Computing for Engineering. Civil-Comp Press.
Bouvry, P., Chetsa, G. L. T., Costa, G. D., Jeannot, E., Lefèvre, L., Pierson, J.-M., Pinel, F., Stolf, P., & Varrette, S. (2015). Energy Efficiency and High-Performance Computing. In J.-M., Pierson (Ed.), Large-scale Distributed Systems and Energy Efficiency: A Holistic View (pp. 197--224). John Wiley Sons.
Dumas, J.-G., Roch, J.-L., Tannier, E., & Varrette, S. (2015). Foundations of Coding: Compression, Encryption, Error-Correction. Wiley Sons.
Varrette, S., Bouvry, P., Jarus, M., & Oleksiak, A. (2015). Energy efficiency in HPC Data Centers: Latest Advances to Build the Path to Exascale. Handbook on Data Centers. Springer.
Ghosal, A., Upadhyaya, B. B., Fritz, J., Heintz, A., Desai, M., Dilimulati, Y., Huang, D., Baumuratov, A., Wang, K., Galas, D. J., & Wilmes, P. (2015, January 21). The extracellular RNA complement of Escherichia coli. MicrobiologyOpen.
Pereira Coutada Miranda, H., & Wirtz, L. (2015, January). A force-constant model of graphene for conductivity calculations. Poster session presented at Euro-TMCS I - Theory, Modelling and Computational Methods for Semiconductors, Granada, Spain.
Allix, K., Bissyande, T. F. D. A., Klein, J., & Le Traon, Y. (2015). Are Your Training Datasets Yet Relevant? - An Investigation into the Importance of Timeline in Machine Learning-Based Malware Detection. Engineering Secure Software and Systems - 7th International Symposium ESSoS 2015, Milan, Italy, March 4-6, 2015. Proceedings (pp. 51-67). Springer International Publishing.
Appelt, D., Nguyen, D. C., & Briand, L. (2015). Behind an Application Firewall, Are We Safe from SQL Injection Attacks? 2015 IEEE 8th International Conference on Software Testing, Verification, and Validation (ICST).
Arcuri, A., Fraser, G., & Galeotti, J. P. (2015). Generating TCP/UDP Network Data for Automated Unit Test Generation. 10th Joint Meeting of the European Software Engineering Conference and the ACM SIGSOFT Symposium on the Foundations of Software Engineering (ESEC/FSE). ACM.
Bouvry, P., Mayer, R., Muszynski, J., Petcu, D., Rauber, A., Tempesti, G., Trinh, & Varrette, S. (2015). Resilience within Ultrascale Computing System: Challenges and Opportunities from Nesus Project. Supercomputing Frontiers and Innovations, 2(2), 46--63.
Fraser, G., & Arcuri, A. (2015). EvoSuite at the SBST 2015 Tool Competition. 8th International Workshop on Search-Based Software Testing (SBST) 2015. ACM.
Hardies, K., May, P., Djémié, T., Tarta-Arsene, O., Deconinck, T., Craiu, D., EuroEPINOMICS RES Consortium, Helbig, I., Suls, A., Balling, R., Weckhuysen, S., De Jonghe, P., & Hirst, J. (2015). Recessive loss-of-function mutations in AP4S1 cause mild fever-sensitive seizures, developmental delay and spastic paraplegia through loss of AP-4 complex assembly. Human Molecular Genetics, 24(8), 2218-2227.
Hunegnaw, A., & Teferle, F. N. (2015). Assessment of BLT Tide Gauge Benchmark Monitoring (TIGA) repro2 solutions. Poster session presented at AGU Fall Meeting 2015, San Francisco, CA, USA, 14-18 December.
Mazzali, N., Stante, G., Shankar, B., & Ottersten, B. (2015). Performance Analysis of Noncoherent Frame Synchronization in Satellite Communications with Frequency Uncertainty. Proceedings on IEEE Symposium on Communications and Vehicular Technology in the Benelux.
Mizera, A., Pang, J., & Yuan, Q. (2015). ASSA-PBN: An approximate steady-state analyser for probabilistic Boolean networks. Proceedings of the 13th International Symposium on Automated Technology for Verification and Analysis (ATVA'15) (pp. 214-220). Springer.
Nielsen, S. S., Danoy, G., Bouvry, P., & Talbi, E.-G. (2015). NK Landscape Instances Mimicking the Protein Inverse Folding Problem Towards Future Benchmarks. GECCO Companion '15 Proceedings of the Companion Publication of the 2015 Annual Conference on Genetic and Evolutionary Computation. New York, USA: ACM.
Nielsen, S. S., Danoy, G., Jurkowski, W., Jimenez Laredo, J. L., Schneider, R., Talbi, E.-G., & Bouvry, P. (2015). A Novel Multi-objectivisation Approach for Optimising the Protein Inverse Folding Problem. Applications of Evolutionary Computation: 18th European Conference, EvoApplications 2015, Copenhagen, Denmark, April 8-10, 2015, Proceedings.
Okawa, S., Espinosa Angarica, V., Lemischka, I., Moore, K., & del Sol Mesa, A. (2015). A differential network analysis approach for lineage specifier prediction in stem cell subpopulations. Systems Biology and Applications.
Roume, H., Buschart, A., Muller, E., May, P., Satagopam, V., Laczny, C. C., Narayanasamy, S., Lebrun, L., Hoopmann, M., Schupp, J., Gillece, J., Hicks, N., Engelthaler, D., Sauter, T., Keim, P., Moritz, R., & Wilmes, P. (2015). Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks. Biofilms and Microbiomes, 1(15007).
Trujillo Rasua, R., & Yero, I. G. (2015). k-Metric Antidimension: a Privacy Measure for Social Graphs. Information Sciences, 328, 403 – 417.
Berryman, J., & Schilling, T. (2014). Absolute Free Energies for Biomolecules in Implicit or Explicit Solvent. Physics Procedia, 57, 7-15.
Allix, K., Bissyande, T. F. D. A., Jerome, Q., Klein, J., State, R., & Le Traon, Y. (2014, December 24). Empirical assessment of machine learning-based malware detectors for Android: Measuring the Gap between In-the-Lab and In-the-Wild Validation Scenarios. Empirical Software Engineering, 1-29.
Krishna, A., Biryukov, M., Trefois, C., Antony, P., Hussong, R., Lin, J., Heinäniemi, M., Glusman, G., Köglsberger, S., Boyd, O., van den Berg, B. H. J., Linke, D., Huang, D., Wang, K., Hood, L., Tholey, A., Schneider, R., Galas, D. J., Balling, R., & May, P. (2014). Systems genomics evaluation of the SH-SY5Y neuroblastoma cell line as a model for Parkinson’s disease. BMC Genomics, 15(1154).
Correa Bahnsen, A., Aouada, D., & Ottersten, B. (2014). Example-Dependent Cost-Sensitive Logistic Regression for Credit Scoring. 2014 13th International Conference on Machine Learning and Applications (pp. 263-269). Detroit, Uni: IEEE.
Plugaru, V., Varrette, S., & Bouvry, P. (2014). Performance Analysis of Cloud Environments on Top of Energy-Efficient Platforms Featuring Low Power Processors. Proc. of the 6th IEEE Intl. Conf. on Cloud Computing Technology and Science (CloudCom'14). Singapore, Singapore: IEEE Computer Society.
Muller, E., Pinel, N., Laczny, C. C., Hoopmann, M., Narayanasamy, S., Lebrun, L., Roume, H., Lin, J., May, P., Hicks, N., Buschart, A., Wampach, L., Liu, C., Price, L., Gillece, J., Guignard, C., Schupp, J., Vlassis, N., Baliga, Moritz, R., Keim, P., & Wilmes, P. (2014, November). Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage. Nature Communications.
Eibelt, U., Trovato, A., Kloth, M., Gentz, E., Finke, R., Spranger, J., Galas, D. J., Weber, S., Wolf, C.-A., König, K., Arlt, W., Büttner, R., May, P., Allolio, B., & Schneider, J. (2014, October 03). Molecular and Clinical Evidence for an ARMC5 Tumor Syndrome: Concurrent Inactivating Germline and Somatic Mutations are Associated with both Primary Macronodular Adrenal Hyperplasia and Meningioma. Journal of Clinical Endocrinology and Metabolism.
Endlich, M., Pereira Coutada Miranda, H., Molina-Sanchez, A., Wirtz, L., & Kröger, J. (2014). Moiré-induced replica of graphene phonons on Ir(111). Annalen der Physik, 526(9-10), 372-380.
Muszynski, J., Varrette, S., Jimenez Laredo, J. L., & Bouvry, P. (2014). Exploiting the Hard-wired Vulnerabilities of Newscast via Connectivity-splitting Attack. Proc. of the IEEE Intl. Conf. on Network and System Security (NSS 2014). Xi'an, China: Springer Verlag.
Plugaru, V., Varrette, S., & Bouvry, P. (2014, October). Performance tuning of applications in HPC environments employing Simulated Annealing. Paper presented at Intl. Conf. on Metaheuristics and Nature Inspired Computing (META'14).
Muszynski, J., Varrette, S., Laredo, J. L. J., & Bouvry, P. (2014). Analysis of the Data Flow in the Newscast Protocol for Possible Vulnerabilities. Proc. of Intl. Conf. on Cryptography and Security System (CSS'14). Lublin, Poland: Springer.
Varrette, S., Plugaru, V., Guzek, M., Besseron, X., & Bouvry, P. (2014). HPC Performance and Energy-Efficiency of the OpenStack Cloud Middleware. Proc. of the 43rd Intl. Conf. on Parallel Processing (ICPP-2014), Heterogeneous and Unconventional Cluster Architectures and Applications Workshop (HUCAA'14). Minneapolis, MN, US: IEEE.
Trefois, C. (2014). Detection and characterization of critical transitions in mitochondrial activity via high content screening. Unpublished doctoral thesis, University of Luxembourg, ​Luxembourg, ​​Luxembourg.
Turci, F., & Schilling, T. (2014). Crystal growth from a supersaturated melt: Relaxation of the solid-liquid dynamic stiffness. Journal of Chemical Physics, 141, 054706.
Varrette, S., Bouvry, P., Cartiaux, H., & Georgatos, F. (2014). Management of an Academic HPC Cluster: The UL Experience. Proc. of the 2014 Intl. Conf. on High Performance Computing Simulation (HPCS 2014). Bologna, Italy: IEEE.
Michael, M. (2014). A Discrete Approach to Describe the Kinematics between Snow and a Tire Tread. Unpublished doctoral thesis, University of Luxembourg, ​​Luxembourg.
Allix, K., Bissyande, T. F. D. A., Klein, J., & Le Traon, Y. (2014). Machine Learning-Based Malware Detection for Android Applications: History Matters! Luxembourg, Luxembourg: University of Luxembourg, SnT.
Michael, M., & Peters, B. (2014, May 21). A Discrete Approach to Describe the Interaction between a Tire Tread and a Snow-Covered Road. Paper presented at Seminar of the Institute of Materials Simulation, Fürth, Germany.
Bertholon, B., Varrette, S., & Bouvry, P. (2014). Comparison of Multi-objective Optimization Algorithms for the JShadObf JavaScript Obfuscator. Proc. of the 17th Intl. Workshop on Nature Inspired Distributed Computing (NIDISC 2014), part of the 28th IEEE/ACM Intl. Parallel and Distributed Processing Symposium (IPDPS 2014). Phoenix, Arizona, USA: IEEE Computer Society.
Varrette, S., Bouvry, P., Georgatos, F., & Cartiaux, H. (2014, May). HPC platforms @ UL: Overview (as of 2014) and Usage. Paper presented at 1st High Performance Computing School, University of Luxembourg, Luxembourg, Luxembourg.
Heintz, A., May, P., Laczny, C. C., Lebrun, L., Wampach, L., Hogan, A., Schneider, J., Wilmes, P., & De Beaufort, C. (2014, April 30). Integrated Omic Analyses of the Human Gut Microbiome in a Multiplex Family Study of Type 1 Diabetes Mellitus. Poster session presented at EMBO|EMBL Symposium: Translating Diabetes.
Dorosz, S., Shegokar, N., Schilling, T., & Oettel, M. (2014, April). Strong Effect ofWeak Charging in Suspensions of Anisotropic Colloids. Soft Matter.
Lara, C., Reynolds, N., Berryman, J., Xu, A., Zhang, A., & Mezzenga, R. (2014). ILQINS hexapeptide, identified in lysozyme left-handed helical ribbons and nanotubes, forms right-handed helical ribbons and crystals. Journal of the American Chemical Society, 136(12), 4732-4739.
Mahmoudi, A. H., Hoffmann, F., & Peters, B. (2014). Detailed numerical modeling of pyrolysis in a heterogeneous packed bed using XDEM. Journal of Analytical and Applied Pyrolysis, 106, 9–20.
Muszynski, J., Varrette, S., & Bouvry, P. (2014, March). On the Resilience of the Newscast Protocol in the Presence of Cheaters. Paper presented at 2014 Grande Region Security and Reliability Day (GRSRD 2014), Saarbrucken, Germany.
Plugaru, V., Varrette, S., Pinel, F., & Bouvry, P. (2014). Evaluating the HPC Performance and Energy-Efficiency of Intel and ARM-based systems with synthetic and bioinformatics workloads. CSC.
Mahmoudi, A. H., Hoffmann, F., & Peters, B. (2014). Application of XDEM as a novel approach to predict drying of a packed bed. International Journal of Thermal Sciences, 75, 65e75.
Dorosz, S., & Schilling, T. (2014). Infuence of random pinning on the crystallization process in suspensions of hard spheres. Journal of Crystallization Process and Technology, 4(2).
Radu, M., & Schilling, T. (2014). Solvent hydrodynamics speed up crystal nucleation in suspensions of hard spheres. Europhysics Letters [=EPL], 105.
Turci, F., Schilling, T., Yamani, M. H., & Oettel, M. (2014). Solid phase properties and crystallization in simple model systems. European Physical Journal. Special Topics, 223, 421-438.
Anwar, M., Berryman, J., & Schilling, T. (2014). Crystal nucleation mechanism in melts of short polymer chains under quiescent conditions and under shear flow. Journal of Chemical Physics, (141), 124910.
Biryukov, A., Roy, A., & Velichkov, V. (2014). Differential Analysis of Block Ciphers SIMON and SPECK. Fast Software Encryption - 21st International Workshop (Lecture Notes in Computer Science). Springer International Publishing.
Biryukov, A., & Velichkov, V. (2014). Automatic Search for Differential Trails in ARX Ciphers. Topics in Cryptology – CT-RSA 2014 Lecture Notes in Computer Science (pp. 227-250). Springer International Publishing.
Correa Bahnsen, A., Stojanovic, A., Aouada, D., & Ottersten, B. (2014). Improving Credit Card Fraud Detection with Calibrated Probabilities. Proceedings of the fourteenth SIAM International Conference on Data Mining, Philadelphia, Pennsylvania, USA, April 24-26, 2014 (pp. 677-685). Philadelphia, USA: Society for Industrial and Applied Mathematics.
Dorronsoro, B., Ruiz, P., Talbi, E.-G., & Piyatumrong, A. (2014). Optimizing AEDB Broadcasting Protocol with Parallel Multi-objective Cooperative Coevolutionary NSGAII. Optimizing AEDB Broadcasting Protocol with Parallel Multi-objective Cooperative Coevolutionary NSGAII.
Guzek, M., Varrette, S., Plugaru, V., Pecero, J., & Bouvry, P. (2014). A Holistic Model of the Performance and the Energy-Efficiency of Hypervisors in an HPC Environment. Concurrency & Computation : Practice & Experience.
Jimenez Laredo, J. L., Nielsen, S. S., Danoy, G., Bouvry, P., & fernandes, C. (2014). Cooperative Selection: Improving Tournament Selection via Altruism. The 14th European Conference on Evolutionary Computation in Combinatorial Optimisation.
Killcoyne, S., & del Sol Mesa, A. (2014). FIGG: Simulating populations of whole genome sequences for heterogeneous data analyses. BMC Bioinformatics, 15(1).
Kratzer, K., Berryman, J., Taudt, A., Zeman, J., & Arnold, A. (2014). The Flexible Rare Event Sampling Harness System (FRESHS). Computer Physics Communications.
Mezmaz, M., Mehdi, M., Bouvry, P., Talbi, E.-G., & Tuyttens, D. (2014). Solving the three dimensional quadratic assignment problem on a computational grid. Cluster Computing, 17(2), 205-217.
Michael, M., Vogel, F., & Peters, B. (2014). XDEM - FEM Coupling Simulations of the Interactions between a Tire Tread and Granular Terrain. Eprint/Working paper retrieved from http://orbi.ulg.ac.be/handle/10993/17044.
Nielsen, S. S., Jurkowski, W., Danoy, G., Jimenez Laredo, J. L., Schneider, R., Talbi, E.-G., & Bouvry, P. (2014). Evolutionary multi objective optimisation with diversity as objective for the protein structure similarity problem. Paper presented at Natural computing for protein structure prediction Workshop, 13th International Conference on Parallel Problem Solving From Nature (PPSN), Ljubljana, Slovenia.
Nielsen, S. S., Jurkowski, W., Danoy, G., Jimenez Laredo, J. L., Schneider, R., Talbi, E.-G., & Bouvry, P. (2014). Evolutionary Multi-Objective Optimisation with Quantile Constraint for the Protein Structure Similarity Problem. Paper presented at 5th International Conference on Metaheuristics and Nature Inspired Computing (META).
Anwar, M., Turci, F., & Schilling, T. (2013). Crystallization mechanism in melts of short n-alkane chains. Journal of Chemical Physics, 139(21).
Michael, M., Vogel, F., & Peters, B. (2013, November 26). AN EFFICIENT 3D DEM–FEM COUPLING FOR GRANULAR MATTER APPLICATIONS. Paper presented at NAFEMS European Conference on Coupled MBS-FE Applications.
Michael, M., Peters, B., & Vogel, F. (2013, November). An Efficient 3D FEM - DEM Coupling for Granular Matter Applications. Coupled MBS-FE Applications: A New Trend in Simulation.
Michael, M., Peters, B., & Vogel, F. (2013, October 22). Simulation of the Tractive Performance of Tire Treads on Granular Terrain by Means of Finite and Discrete Element Coupling. Paper presented at 14. Internationale VDI-Tagung "Reifen-Fahrwerk-Fahrbahn" 2013.
Delplace, V., Manneback, P., Pinel, F., Varrette, S., & Bouvry, P. (2013). Comparing the Performance and Power Usage of GPU and ARM Clusters for Map-Reduce. Proc. of the 3rd Intl. Conf. on Cloud and Green Computing (CGC'13). IEEE Computer Society.
Michael, M., Peters, B., & Vogel, F. (2013). Simulation des Traktionsverhaltens von Reifen auf granularem Untergrund durch eine Kopplung zwischen der Finiten (FEM) und der Diskreten Element Methode (DEM). VDI-Berichte "Reifen-Fahrwerk-Fahrbahn". Düsseldorf, Germany: VDI Verlag GmbH.
Varrette, S., Guzek, M., Plugaru, V., Besseron, X., & Bouvry, P. (2013). HPC Performance and Energy-Efficiency of Xen, KVM and VMware Hypervisors. Proc. of the 25th Symposium on Computer Architecture and High Performance Computing (SBAC-PAD 2013).
Plugaru, V., Georgatos, F., Varrette, S., & Bouvry, P. (2013). Performance tuning of applications for HPC systems employing Simulated Annealing optimization. Luxembourg, Luxembourg: CSC.
Peters, B., & Amir, M. (2013). Die Extended Discrete Element Method (XDEM) als integraler Ansatz für reagierende Mehrphasenströmungen. 26. Deutscher Flammentag Verbrennung und Feuerung. Düsseldorf, Germany: VDI Verlag.
Schaberreiter, T., Varrette, S., Bouvry, P., Röning, J., & Khadraoui, D. (2013). Dependency Analysis for Critical Infrastructure Security Modelling: A Case Study within the Grid'5000 Project. Proc. of the 3th IFIP Intl. SeCIHD'2013 Workshop, part of the 8th Intl. Conf. on Availability, Reliability and Security (ARES'13) (pp. 269-287). Regensburg, Germany: Springer Verlag.
Cowan, N., Jonard, N., & Wehuizen, R. (2013, June). Organizations and Emotions: Design, Contagion and Performance. Paper presented at 18th Workshop on Economies with Heterogeneous Interacting Agents.
Michael, M., & Peters, B. (2013). 3D DEM – FEM Coupling to Analyse the Tractive Performance of Different Tire Treads in Soil. In S., Idelsohn, M., Papadrakakis, & B., Schrefler (Eds.), Computational Methods for Coupled Problems in Science and Engineering V. Barcelona, Spain: CIMNE.
Bertholon, B., Varrette, S., & Martinez, S. (2013). ShadObf: A C-source Obfuscator based on Multi-objective Optimization Algorithms. Proc. of the 16th Intl. Workshop on Nature Inspired Distributed Computing (NIDISC 2013), part of the 27th IEEE/ACM Intl. Parallel and Distributed Processing Symposium (IPDPS 2013). Boston (Massachusetts), USA: IEEE Computer Society.
Peters, B. (2013). The extended discrete element method (XDEM) for multi-physics applications. Scholarly Journal of Engineering Research, 2, 1-20.
Michael, M., Peters, B., & Nicot, F. (2013, April 23). Discrete Modeling of Inter-Granular Bonds between Snow Grains. Paper presented at PARTEC 2013.
Hoffmann, F., & Peters, B. (2013). Extended Discrete Element Method (XDEM) to Model Heterogeneous Reactions in Packed Beds. PARTEC - International Congress on Particle Technology.
Jarus, M., Varrette, S., Oleksiak, A., & Bouvry, P. (2013). Performance Evaluation and Energy Efficiency of High-Density HPC Platforms Based on Intel, AMD and ARM Processors. Proc. of the Intl. Conf. on Energy Efficiency in Large Scale Distributed Systems (EE-LSDS'13). Vienna, Austria: Springer Verlag.
Michael, M., Nicot, F., & Peters, B. (2013). Discrete Element Modeling of Inter-Granular Bonds between Snow Grains. PARTEC - International Congress on Particle Technology.
Estupinan Donoso, A. A., Hoffmann, F., & Peters, B. (2013). eXtended Discrete Element Method used for convective heat transfer predictions. International Review of Mechanical Engineering, 7(2), 329-336.
Baum, J., Cowan, R., & Jonard, N. (2013). Prescriptions for Network Strategy: Does Evidence of Network Effects in Cross-Section Support them? Strategic Management Journal.
Besseron, X., Hoffmann, F., Michael, M., & Peters, B. (2013). Unified Design for Parallel Execution of Coupled Simulations using the Discrete Particle Method. Proceedings of the Third International Conference on Parallel, Distributed, Grid and Cloud Computing for Engineering. Stirlingshire, United Kingdom: Civil-Comp Press.
Caldeira, F., Schaberreiter, T., Varrette, S., Monteiro, E., Sim$\texto$es, P., Khadraoui, D., & Bouvry, P. (2013). Trust Based Interdependency Weighting for On-line Risk Monitoring in Interdependent Critical Infrastructures. International Journal of Secure Software Engineering, 4(4), 47-69.
Dorronsoro, B., Burguillo, J. C., Peleteiro, A., & Bouvry, P. (2013). Evolutionary algorithms based on game theory and cellular automata with coalitions. In I., Zelinka, V., Snasel, & A., Abraham (Eds.), Handbook of Optimization (pp. 481-503). Springer.
Dorronsoro, B., Danoy, G., Nebro, A. J., & Bouvry, P. (2013). Achieving super-linear performance in parallel multi-objective evolutionary algorithms by means of cooperative coevolution. Computers and Operations Research, 40(6), 1552-1563.
Guzek, M., Varrette, S., Plugaru, V., Pecero, J., & Bouvry, P. (2013). A Holistic Model of the Performance and the Energy-Efficiency of Hypervisors in an HPC Environment. Energy Efficiency in Large Scale Distributed Systems (pp. 133-152). Springer.
Jiang, W., Li, Z., van Dam, T., & Ding, W. (2013). Comparative analysis of different environmental loading methods and their impacts on the GPS height time series. Journal of Geodesy, 87(7), 687-703.
Martinez, S., Varrette, S., & Bertholon, B. (2013). Optimisation d'obfuscation de code source au moyen d'algorithmes évolutionnaires multi-objectifs. Poster session presented at ComPAS’13.
Muszynski, J., Varrette, S., & Bouvry, P. (2013). Expected Running Time of Parallel Evolutionary Algorithms on Unimodal Pseudo-Boolean Functions over Small-World Networks. Proc. of the IEEE Congress on Evolutionary Computation (CEC'2013). Cancún, Mexico: IEEE.
Nielsen, S. S., Danoy, G., & Bouvry, P. (2013). Vehicular mobility model optimization using cooperative coevolutionary genetic algorithms. Proceedings of the Genetic and Evolutionary Computation Conference (GECCO '13) (pp. 1349-1356). ACM.
Peters, B. (2013). The extended discrete element method (XDEM) for multi-physics applications. Scholarly Journal of Engineering Research.
Peters, B. (2013). The Extended Discrete Element Method (XDEM) for Multi-Physics Applications. Paper presented at Swedish-Finnish Flame Days 2013.
Peters, B. (2013). Multi-physikalische Anwendungen mit der Extended Discrete Element Method (XDEM). Paper presented at Invited lecture.
Peters, B. (2013). Simulation von reagierenden Mehrphasen- strömungen mit der Extended Discrete Element Method (XDEM). Paper presented at ERCOFTAC Technologietag.
Peters, B., Besseron, X., Estupinan Donoso, A. A., Hoffmann, F., Michael, M., & Mahmoudi, A. H. (2013). Application of the Extended Discrete Element Method (XDEM) in Computer-Aided Process Engineering. Paper presented at CAPE Forum 2013 Computer Aided Process Engineering.
Peters, B., Besseron, X., Estupinan Donoso, A. A., Hoffmann, F., Michael, M., & Mahmoudi, A. H. (2013). Enhanced Thermal Process Engineering by the Extended Discrete Element Method (XDEM). Universal Journal of Engineering Science, 1, 139-145.
Peters, B., Besseron, X., Estupinan Donoso, A. A., Hoffmann, F., Michael, M., Mahmoudi, A. H., Dziugys, A., & Vogel, F. (2013). Die Extended Discrete Element Method (XDEM) für multiphysikalische Anwendungen. Paper presented at 31. CADFEM User Meeting, Mannheim.
Schleich, J., Danoy, G., Dorronsoro, B., & Bouvry, P. (2013). An Overlay Approach for Optimising Small-World Properties in VANETs. Proceedings of the 16th European Conference on Applications of Evolutionary Computation (EvoApplications) (pp. 32-41).
Schleich, J., Panchapakesan, A., Danoy, G., & Bouvry, P. (2013). UAV fleet area coverage with network connectivity constraint. Proceedings of the 11th ACM International Symposium on Mobility Management and Wireless Access (MobiWac'13) (pp. 131-138). ACM.
Stathakis, A., Danoy, G., Schleich, J., Bouvry, P., & Morelli, G. (2013). Minimising longest path length in communication satellite payloads via metaheuristics. Proceedings of the Genetic and Evolutionary Computation Conference, GECCO '13 (pp. 1365-1372). ACM.
Varrette, S., Danoy, G., Guzek, M., Besseron, X., & Bouvry, P. (2013). Using Data-flow analysis in MAS for power-aware HPC runs. Proc. of the IEEE Intl. Conf. on High Performance Computing and Simulation (HPCS'13). IEEE Computer Society.
Michael, M., Peters, B., & Vogel, F. (2012, September 04). Resolution of Different Length Scales by an Efficient Combination of the Finite and the Discrete Element Method. Paper presented at Eleventh International Conference on Computational Structures Technology.
Varrette, S., Muszynski, J., & Bouvry, P. (2012). Hash function generation by means of Gene Expression Programming. Intl. Conf. on Cryptography and Security System (CSS’12), XII(3), 37 - 53.
Pecero, J., Dorronsoro, B., Guzek, M., & Bouvry, P. (2012). Memetic Algorithms for Energy-Aware Computation and Communications Optimization in Computing Clusters. In I., Ahmad & S., Ranka (Eds.), Handbook energy-aware and green computing (pp. 443 - 473). Chapman and Hall/CRC Press.
Berryman, J., & Schilling, T. (2012). Free Energies by Thermodynamic Integration Relative to an Exact Solution, Used to Find the Handedness-Switching Salt Concentration for DNA. Journal of Chemical Theory and Computation.
Bertholon, B., Varrette, S., & Bouvry, P. (2012). CERTICLOUD, une plate-forme Cloud IaaS sécurisée. Technique et Science Informatiques, 31(8-9-10), 1121-1152.
Danoy, G., Dorronsoro, B., & Bouvry, P. (2012). New State-of-the-art Results for Cassini2 Global Trajectory Optimization Problem. Acta Futura : The Journal of the Advanced Concepts Team, 5, 56 - 72.
Dorronsoro, B., & Bouvry, P. (2012). Study of Different Small-world Topology Generation Mechanisms for Genetic Algorithms. IEEE Congress on Evolutionary Computation (pp. 1580 - 1587). IEEE.
Guzek, M., Diaz, C., Pecero, J., Bouvry, P., & Zomaya, A. Y. (2012). Impact of Voltage Levels Number for Energy-aware Bi-objective DAG Scheduling for Multi-processors Systems. Advances in Information Technology: 5th International Conference, IAIT 2012, Bangkok, Thailand, December 6-7, 2012, Proceedings (pp. 70-80). Springer.
Iturriaga, S., Nesmachnow, S., & Dorronsoro, B. (2012). A Multithreading Local Search For Multiobjective Energy-Aware Scheduling In Heterogeneous Computing Systems. European Conference on Modelling and Simulation (ECMS) (pp. 1 - 7).
Jimenez Laredo, J. L., Dorronsoro, B., Pecero, J., Bouvry, P., Durillo, J. J., & Fernandes, C. (2012). Designing a Self-organized Approach for Scheduling Bag-of-Tasks. Designing a Self-organized Approach for Scheduling Bag-of-Tasks (pp. 315-320).
Michael, M., Peters, B., & Vogel, F. (2012). Resolution of Different Length Scales by an Efficient Combination of the Finite Element Method and the Discrete Element Method. In B. H. V., Topping (Ed.), Proceedings of the Eleventh International Conference on Computational Structures Technology (pp. 249). Stirlingshire, United Kingdom: Civil-Comp Press.
Muszynski, J., Varrette, S., Jimenez Laredo, J. L., Dorronsoro, B., & Bouvry, P. (2012). Convergence of Distributed Cellular Evolutionary Algorithms in Presence of Crash Faults and Cheaters. Paper presented at Proc. of the Intl. Conf. on Metaheuristics and Nature Inspired Computing (META'12).
Nielsen, S. S., Dorronsoro, B., Danoy, G., & Bouvry, P. (2012). Novel efficient asynchronous cooperative co-evolutionary multi-objective algorithms. Congress on Evolutionary Computation (CEC) (pp. 1-7). IEEE.
Pinel, F., Dorronsoro, B., Pecero, J., Bouvry, P., & Khan, S. U. (2012). A two-phase heuristic for the energy-efficient scheduling of independent tasks on computational grids. Cluster Computing.
Ruiz, P., Dorronsoro, B., Bouvry, P., & Tardon, L. J. (2012). Information Dissemination in VANETs based upon a Tree Topology. Ad Hoc Networks, 10(1), 111-127.
Ruiz, P., Dorronsoro, B., Valentini, G., Pinel, F., & Bouvry, P. (2012). Optimisation of the enhanced distance based broadcasting protocol for MANETs. Journal of Supercomputing, 62(3), 1213-1240.
Stathakis, A., Danoy, G., Bouvry, P., & Morelli, G. (2012). Satellite Payload Reconfiguration Optimisation: An ILP Model. Proceedings of the 4th Asian Conference on Intelligent Information and Database Systems (ACIIDS'12) (pp. 311-320). Springer.
Stathakis, A., Danoy, G., Veneziano, T., Schleich, J., & Bouvry, P. (2012). Optimising Satellite Payload Reconfiguration: An ILP Approach for Minimising Channel Interruptions. 2nd ESA Workshop on Advanced Flexible Telecom Payloads (pp. 1-8). ESA.
Barrios Hernandez, C. J., Sierra, D. A., Varrette, S., & Pacheco, D. L. (2011). Energy Efficiency on Scalable Computing Architectures. 11th IEEE Intl. Conf. on Computer and Information Technology (CIT’11) (pp. 635 - 640). IEEE.
Bertholon, B., Varrette, S., & Bouvry, P. (2011). CertiCloud: a Novel TPM-based Approach to Ensure Cloud IaaS Security. 4th IEEE Intl. Conf. on Cloud Computing (CLOUD 2011) (pp. 121 - 130). IEEE Computer Society.
Varrette, S., Bertholon, B., & Bouvry, P. (2011). A Signature Scheme for Distributed Executions based on Control flow Analysis. 19th Intl. conference on Security and Intelligent Information Systems (SIIS 2011) (pp. 85-95). Springer.
Bertholon, B., Cérin, C., Coti, C., Dubacq, J.-C., & Varrette, S. (2011). Practical Security in Distributed Systems. In S., Haddad, F., Kordon, L., Pautet, & L., Petrucci (Eds.), Distributed Systems; Design and Algorithms, 1 (pp. 243--306). Whiley and Son.
Bertholon, B., Varrette, S., & Bouvry, P. (2011). CertiCloud: une plate-forme Cloud IaaS sécurisée. RenPar'20 2011, 0-10.
Bertholon, B., Varrette, S., & Bouvry, P. (2011). TPM-based Approaches to Improve Cloud Security. Paper presented at 2011 Grande Region Security and Reliability Day (SecDay 2011).
Diaz, C., Guzek, M., Pecero, J., Bouvry, P., & Khan, S. U. (2011). Scalable and Energy-Efficient Scheduling Techniques for Large-Scale Systems. Computer and Information Technology (CIT), 2011 IEEE 11th International Conference on (pp. 641-647).
Diaz, C., Guzek, M., Pecero, J., Danoy, G., Bouvry, P., & Khan, S. U. (2011). Energy-Aware Fast Scheduling Heuristics in Heterogeneous Computing Systems. High Performance Computing and Simulation (HPCS), 2011 International Conference on (pp. 478-484).
Dorronsoro, B., & Bouvry, P. (2011). Adaptive Neighborhoods for Cellular Genetic Algorithms. Nature Inspired Distributed Computing (NIDISC) sessions of the International Parallel and Distributed Processing Symposium (IPDPS) 2011 Workshop, 383-389.
Dorronsoro, B., & Bouvry, P. (2011). Differential Evolution Algorithms with Cellular Populations. Lecture Notes in Computer Science, 6239, 320-330.
Dorronsoro, B., & Bouvry, P. (2011). Improving Classical and Decentralized Differential Evolution with New Mutation Operator and Population Topologies. IEEE Transactions on Evolutionary Computation, 15(1), 67-98.
Dorronsoro, B., & Bouvry, P. (2011). On the use of Small-world Population Topologies for Genetic Algorithms. EVOLVE 2011 A bridge between Probability, Set Oriented Numerics and Evolutionary Computation (pp. 1-3).
Dorronsoro, B., Danoy, G., Bouvry, P., & Nebro, A. J. (2011). Multi-objective Cooperative Coevolutionary Evolutionary Algorithms for Continuous and Combinatorial Optimization. Intelligent Decision Systems in Large-Scale Distributed Environments (pp. 49-74). Springer.
Guzek, M., Pecero, J., Dorronsoro, B., & Bouvry, P. (2011). Energy-Aware Scheduling of Parallel Applications with Multi-Objective Evolutionary Algorithm. EVOLVE 2011, A bridge between Probability, Set Oriented Numerics and Evolutionary Computation, Bourglinster Castle, Luxembourg, May 25-27 2011 (pp. 1-4).
Ruiz, P., Dorronsoro, B., & Bouvry, P. (2011). Optimization and Performance Analysis of the AEDB Broadcasting Algorithm. IEEE International Workshop on Wireless Mesh and Ad Hoc Networks (pp. 1-6). IEEE.
Varrette, S., Muszynski, J., & Bouvry, P. (2011). Cheating impact on distributed Evolutionary Algorithms over BOINC computations. n Proc. of the 19th Intl. conference on Security and Intelligent Information Systems (SIIS 2011).
Varrette, S., Tantar, E., & Bouvry, P. (2011). On the Resilience of [Distributed] EAs against Cheaters in Global Computing Platforms. 25th IEEE International Symposium on Parallel and Distributed Processing (IPDPS 2011) (pp. 409-417). IEEE.
Varrette, S., Tantar, E., & Bouvry, P. (2011). On the Resilience of [distributed] Evolutionary Algorithms against Cheaters in Global Computing Platforms. Proc. of the 14th Intl. Workshop on Nature Inspired Distributed Computing (NIDISC 2011), part of the 25th IEEE/ACM Intl. Parallel and Distributed Processing Symposium (IPDPS 2011). Anchorage (Alaska), USA: IEEE Computer Society.
Pecero, J., Varrette, S., & Bouvry, P. (2010, October). Scheduling DAG applications on multi-core processor packages architectures. Paper presented at International Conference on Metaheuristics and Nature Inspired Computing 2010, Tunisia.
Danoy, G., Gaspar Pinto, F., Dorronsoro, B., & Bouvry, P. (2010). Hybrid Cellular Genetic Algorithm for Global Trajectory Optimization Problem. International Conference on Metaheuristics and Nature Inspired Computing (pp. 1-2).
Dorronsoro, B., Bouvry, P., & Alba, E. (2010). Iterated Local Search for de Novo Genomic Sequencing. Lecture Notes in Computer Science, 6114, 428-436.
Dorronsoro, B., Bouvry, P., Cañero, J. A., Maciejewski, A. A., & Siegel, H. J. (2010). Multi-objective Robust Static Mapping of Independent Tasks on Grids. World Conference in Computational Intelligence (WCCI) (pp. 3389-3396). IEEE.
Dorronsoro, B., Cañero, J. A., Danoy, G., & Bouvry, P. (2010). A New Parallel Multi-objective Cooperative Coevolutionary Algorithm Based on SPEA2. ALIO-INFORMS Joint International Meeting 2010 (pp. 1-2).
Guzek, M., Pecero, J., Dorronsoro, B., Bouvry, P., & Khan, S. U. (2010). A Cellular Genetic Algorithm for Scheduling Applications and Energy-Aware Communication Optimization. Proceedings of the 2010 International Conference on High Performance Computing & Simulation (pp. 241-248).
Dunlop, D., Varrette, S., & Bouvry, P. (2009). Deskilling HPL - Using an Evolutionary Algorithm to Automate Cluster Benchmarking. Proc. of 8th Intl. conf. on Parallel Processing and Applied Mathematics (PPAM 2009), 6068(LNCS), 102--114.
Guelton, S., & Varrette, S. (2009, September). Une approche génétique et source à source de l'optimisation de code. Paper presented at Proc. des 19ème rencontres francophones du parallélisme (RenPar'19).
Berhe, G., Peters, B., Varrette, S., & Bouvry, P. (2009). Parallel implementation of domain decomposition algorithm for molecular dynamics. PARENG 2007 (pp. 1-19). Civil-Comp Press.
Danoy, G., Dorronsoro, B., & Bouvry, P. (2009). Overcoming partitioning in large ad hoc networks using genetic algorithms. GECCO '09: Proceedings of the 11th Annual conference on Genetic and evolutionary computation (pp. 1347–1354). ACM.
Dorronsoro, B., Ruiz, P., Danoy, G., Bouvry, P., & Tardon, L. (2009). Towards Connectivity Improvement in VANETs using Bypass Links. Abstract book of 2009 IEEE Congress on Evolutionary Computation, 2201–2208.
Guelton, S., Gautier, T., Pazat, J.-L., & Varrette, S. (2009). Dynamic Adaptation Applied to Sabotage Tolerance. Proc. of the IEEE 17th Euromicro International Conference on Parallel, Distributed, and Network-Based Processing (PDP 2009) (pp. 237–244). IEEE Computer Society.
Varrette, S., Bertholon, B., & Bouvry, P. (2009). A Signature Scheme for Distributed Executions based on Macro-Dataflow Analysis. Paper presented at 2nd Int. Workshop on Remote Entrusting (Re-Trust 2009).
Dunlop, D., Varrette, S., & Bouvry, P. (2008). On the Use of a Genetic Algorithm in High Performance Computer Benchmark Tuning. IEEE International Symposium on Performance Evaluation of Computer and Telecommunication Systems (SPECTS'08) (pp. 105–113).
Varrette, S., Ostaszewski, M., & Bouvry, P. (2008). Nature inspired Algorithm-Based Fault Tolerance on Global Computing Platforms. Application to Symbolic Regression. International Conference on Metaheuristics and Nature Inspired Computing (META'08).
Varrette, S., Roch, J.-L., Duc, G., & Keryell, R. (2008). Building Secure Resources to Ensure Safe Computations in Distributed and Potentially Corrupted Environments. Euro-Par 2008, Workshop on Secure, Trusted, Manageable and Controllable Grid Services (SGS'08). Springer.